RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 SEPT3Q9UH03 358 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 XPO7Q9UIA9 1087 aaKnown RBP9.37□□□□□ -0.91
PTPRM-210ENST00000578916 ATXN7L1Q9ULK2 861 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-210ENST00000578916 NAALADL1Q9UQQ1 740 aa9.37□□□□□ -0.91
PTPRM-210ENST00000578916 FARP1Q9Y4F1 1045 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-210ENST00000578916 CCDC187A0A096LP49 1063 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 EME2A4GXA9 379 aaPredicted RBP9.36□□□□□ -0.91
PTPRM-210ENST00000578916 M0QYV0 167 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 GABBR2O75899 941 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 PCDH8O95206 1070 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 AFPP02771 609 aaKnown RBP9.36□□□□□ -0.91
PTPRM-210ENST00000578916 ITGB2P05107 769 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 ITGA2BP08514 1039 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 PLK1P53350 603 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 DEFB133Q30KQ1 61 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 ZC3H12AQ5D1E8 599 aaKnown RBP9.36□□□□□ -0.91
PTPRM-210ENST00000578916 RABGAP1LQ5R372 815 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 PIP5KL1Q5T9C9 394 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 OR6B2Q6IFH4 312 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 TAC4Q86UU9 113 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 WDR48Q8TAF3 677 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 FAM149B1Q96BN6 582 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 BTN2A3PQ96KV6 586 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 HSFY1Q96LI6 401 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 IL12RB2Q99665 862 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 SYNDIG1Q9H7V2 258 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 SLC12A6Q9UHW9 1150 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 IPO11Q9UI26 975 aaKnown RBP9.36□□□□□ -0.91
PTPRM-210ENST00000578916 SALL4Q9UJQ4 1053 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 PCDHA7Q9UN72 937 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 MAPK8IP1Q9UQF2 711 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 HS3ST3A1Q9Y663 406 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 CSNK1G3Q9Y6M4 447 aa9.36□□□□□ -0.91
PTPRM-210ENST00000578916 UBR5O95071 2799 aaPredicted RBP9.36□□□□□ -0.91
PTPRM-210ENST00000578916 TCAF2A6NFQ2 919 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 KPNA3O00505 521 aaPredicted RBP9.35□□□□□ -0.91
PTPRM-210ENST00000578916 MUSKO15146 869 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 AQP9O43315 295 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 ACTN4O43707 911 aaKnown RBP9.35□□□□□ -0.91
PTPRM-210ENST00000578916 CSF2P04141 144 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 FYNP06241 537 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 FAM87AP0C7U9 286 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 EPB41P11171 864 aaKnown RBP9.35□□□□□ -0.91
PTPRM-210ENST00000578916 RPIAP49247 311 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 SPIDRQ14159 915 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 FZD2Q14332 565 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 FOXD4L6Q3SYB3 417 aaPredicted RBP9.35□□□□□ -0.91
PTPRM-210ENST00000578916 TTC39BQ5VTQ0 682 aaPredicted RBP9.35□□□□□ -0.91
PTPRM-210ENST00000578916 SEL1L3Q68CR1 1132 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 FOXD4L3Q6VB84 417 aaPredicted RBP9.35□□□□□ -0.91
PTPRM-210ENST00000578916 C14orf80Q86SX3 495 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 PARGQ86W56 976 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 CIR1Q86X95 450 aaPredicted RBP9.35□□□□□ -0.91
PTPRM-210ENST00000578916 JAMLQ86YT9 394 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 FBXO39Q8N4B4 442 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 ATP6V0D2Q8N8Y2 350 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 LMX1AQ8TE12 382 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 TFAP2BQ92481 460 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 GLMNQ92990 594 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 INTS4Q96HW7 963 aaKnown RBP9.35□□□□□ -0.91
PTPRM-210ENST00000578916 BMFQ96LC9 184 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 CCDC114Q96M63 670 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 VPS28Q9UK41 221 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 ZFR2Q9UPR6 939 aaKnown RBP9.35□□□□□ -0.91
PTPRM-210ENST00000578916 BOD1L1Q8NFC6 3051 aa9.35□□□□□ -0.91
PTPRM-210ENST00000578916 SPTY2D1-AS1A0A0U1RR47 76 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 POM121BA6NF01 834 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 KCNU1A8MYU2 1149 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 TPP1O14773 563 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 PLD2O14939 933 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 SART1O43290 800 aaKnown RBP9.34□□□□□ -0.91
PTPRM-210ENST00000578916 PPFIA2O75334 1257 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 MYL1P05976 194 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 CTSLP07711 333 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 PAEPP09466 180 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 NME1P15531 152 aaKnown RBP9.34□□□□□ -0.91
PTPRM-210ENST00000578916 JUNDP17535 347 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 ITGB6P18564 788 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 TBXAS1P24557 533 aaPredicted RBP9.34□□□□□ -0.91
PTPRM-210ENST00000578916 SLC5A2P31639 672 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 CHRNA3P32297 505 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 MCCD1P59942 119 aaPredicted RBP9.34□□□□□ -0.91
PTPRM-210ENST00000578916 LRMPQ12912 555 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 UBAP2LQ14157 1087 aaKnown RBP9.34□□□□□ -0.91
PTPRM-210ENST00000578916 DRAP1Q14919 205 aaPredicted RBP9.34□□□□□ -0.91
PTPRM-210ENST00000578916 STILQ15468 1287 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 CNGA2Q16280 664 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 CBWD6Q4V339 395 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 DCAF17Q5H9S7 520 aaPredicted RBP9.34□□□□□ -0.91
PTPRM-210ENST00000578916 CBWD3Q5JTY5 395 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 CBWD5Q5RIA9 395 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 PERM1Q5SV97 790 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 TCERG1LQ5VWI1 586 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 SYPL2Q5VXT5 272 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 CXorf57Q6NSI4 855 aaKnown RBP9.34□□□□□ -0.91
PTPRM-210ENST00000578916 TMEM270Q6UE05 265 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 KYAT3Q6YP21 454 aaKnown RBP9.34□□□□□ -0.91
PTPRM-210ENST00000578916 ERN2Q76MJ5 926 aaKnown RBP9.34□□□□□ -0.91
PTPRM-210ENST00000578916 SH2D3CQ8N5H7 860 aa9.34□□□□□ -0.91
PTPRM-210ENST00000578916 ATP11CQ8NB49 1132 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms