RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	RETSAT	Q6NUM9	610 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	ALKBH5	Q6P6C2	394 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	SARM1	Q6SZW1	724 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	DSG4	Q86SJ6	1040 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	CACUL1	Q86Y37	369 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	PSTK	Q8IV42	348 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	MMAA	Q8IVH4	418 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	STK40	Q8N2I9	435 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	DEFB119	Q8N690	84 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	ARFGAP1	Q8N6T3	406 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	ATP11C	Q8NB49	1132 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	OR7D4	Q8NG98	312 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	GATA6	Q92908	595 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	EPAS1	Q99814	870 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	SCNM1	Q9BWG6	230 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	MAGEB5	Q9BZ81	275 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	BTBD1	Q9H0C5	482 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	MAGEH1	Q9H213	219 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	DONSON	Q9NYP3	566 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	FZD4	Q9ULV1	537 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	NENF	Q9UMX5	172 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	NCKAP1	Q9Y2A7	1128 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	NUP205	Q92621	2012 aa		13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1D-208	ENST00000578501	PKD1L2	Q7Z442	2459 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	LNP1	A1A4G5	178 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	MCF2L	O15068	1137 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	MID1	O15344	667 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CYP1A2	P05177	515 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	VAV1	P15498	845 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	EPHB2	P29323	1055 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SLC8A1	P32418	973 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ACSL1	P33121	698 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PCK1	P35558	622 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	NUMB	P49757	651 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	IRX4	P78413	519 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TRIM61	Q5EBN2	209 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ERMARD	Q5T6L9	678 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	FAM46C	Q5VWP2	391 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TCEAL6	Q6IPX3	200 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	FAM124A	Q86V42	546 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PYROXD2	Q8N2H3	581 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	RTL3	Q8N8U3	475 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	OR8D1	Q8WZ84	308 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ARHGEF2	Q92974	986 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TCEAL3	Q969E4	200 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	COL26A1	Q96A83	441 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	FAM131C	Q96AQ9	280 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SPON2	Q9BUD6	331 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	NUSAP1	Q9BXS6	441 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TRIM7	Q9C029	511 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CEP44	Q9C0F1	390 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	THAP2	Q9H0W7	228 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CATSPERB	Q9H7T0	1116 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ATP13A1	Q9HD20	1204 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TMEM9B	Q9NQ34	198 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	NDFIP2	Q9NV92	336 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	FBXL12	Q9NXK8	326 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	MYO1A	Q9UBC5	1043 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SUSD2	Q9UGT4	822 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PPM1H	Q9ULR3	514 aa		13.95	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SSU72P8	A0A1W2PR75	194 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PATE3	B3GLJ2	98 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CBX4	O00257	560 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	FGF10	O15520	208 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	RAMP2	O60895	175 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SEMA4F	O95754	770 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SERPINF2	P08697	491 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	GNS	P15586	552 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	GOT1	P17174	413 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SPINK2	P20155	84 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	MIP	P30301	263 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SERPINH1	P50454	418 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ZNF135	P52742	658 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	GEMIN4	P57678	1058 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	YBEY	P58557	167 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ARF5	P84085	180 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	PIGH	Q14442	188 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SLC18A3	Q16572	532 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TSR1	Q2NL82	804 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ASTE1	Q2TB18	679 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CCDC122	Q5T0U0	273 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	DCAF12L1	Q5VU92	463 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501		Q6ZVU0	165 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	RGL4	Q8IZJ4	473 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	NIPA2	Q8N8Q9	360 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	OR2A12	Q8NGT7	310 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ISG20	Q96AZ6	181 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CCDC114	Q96M63	670 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	OMD	Q99983	421 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CAPN10	Q9HC96	672 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	DNAI1	Q9UI46	699 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	HPCAL4	Q9UM19	191 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SLC6A14	Q9UN76	642 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	AP4E1	Q9UPM8	1137 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CEP192	Q8TEP8	1941 aa		13.94	□□□□□ -0.18
CSNK1D-208	ENST00000578501	LAMA1	P25391	3075 aa		13.93	□□□□□ -0.18

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