RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 ACTR3BQ9P1U1 418 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 ACOT9Q9Y305 439 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 MRPL11Q9Y3B7 192 aaKnown RBP4.49□□□□□ -1.69
CDH8-205ENST00000577730 PLEKHG3A1L390 1219 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 H3BM21 787 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 SOAT2O75908 522 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 SNAPC5O75971 98 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 CYP19A1P11511 503 aaPredicted RBP4.49□□□□□ -1.69
CDH8-205ENST00000577730 VARSP26640 1264 aaKnown RBP4.49□□□□□ -1.69
CDH8-205ENST00000577730 NMT1P30419 496 aaKnown RBP4.49□□□□□ -1.69
CDH8-205ENST00000577730 UQCRC1P31930 480 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 CDH15P55291 814 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 PCDH1Q08174 1060 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 GRSF1Q12849 480 aaKnown RBP eCLIP4.49□□□□□ -1.69
CDH8-205ENST00000577730 GALNTL6Q49A17 601 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 PLEKHG4Q58EX7 1191 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 UBE2UQ5VVX9 321 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 ACAD10Q6JQN1 1059 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 PPP1R18Q6NYC8 613 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 SCARA5Q6ZMJ2 495 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 DGLUCYQ7Z3D6 616 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 FBXO11Q86XK2 927 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 ANKRD53Q8N9V6 530 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 CCDC120Q96HB5 630 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 DCAF5Q96JK2 942 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 GLT1D1Q96MS3 346 aa4.49□□□□□ -1.69
CDH8-205ENST00000577730 POP1Q99575 1024 aaKnown RBP4.49□□□□□ -1.69
CDH8-205ENST00000577730 SUCOQ9UBS9 1254 aaKnown RBP4.49□□□□□ -1.69
CDH8-205ENST00000577730 GCC2Q8IWJ2 1684 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 SF3B1O75533 1304 aaKnown RBP eCLIP4.48□□□□□ -1.69
CDH8-205ENST00000577730 TRAFD1O14545 582 aaPredicted RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 CYP27B1O15528 508 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 PSMD3O43242 534 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 DENRO43583 198 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 NPPAP01160 153 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 RPLP0P05388 317 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 RBP1P09455 135 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ZNF37AP17032 561 aaPredicted RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 RRM1P23921 792 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 TGFBR2P37173 567 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 NFIAQ12857 509 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 AP3B2Q13367 1082 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 WSCD2Q2TBF2 565 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 HES5Q5TA89 166 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 CASP12Q6UXS9 341 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ASRGL1Q7L266 308 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 CAND1Q86VP6 1230 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 MEIOBQ8N635 442 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 OR10T2Q8NGX3 314 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 TRPM4Q8TD43 1214 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 MCEEQ96PE7 176 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 PANX3Q96QZ0 392 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 EGFL8Q99944 293 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 TCEAL7Q9BRU2 100 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 AMNQ9BXJ7 453 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 SEZ6LQ9BYH1 1024 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 TBC1D13Q9NVG8 400 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 NXF1Q9UBU9 619 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 AP3M1Q9Y2T2 418 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 CD109Q6YHK3 1445 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 SDR42E2A6NKP2 422 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 M0QYV0 167 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 TRDMT1O14717 391 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 PIGNO95427 931 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 SNRPB2P08579 225 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 IL1R1P14778 569 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 FOXN2P32314 431 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 PTPN5P54829 565 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 DCDC1P59894 354 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 UBE2SQ16763 222 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 FBXO33Q7Z6M2 555 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 CHSY1Q86X52 802 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 MIER2Q8N344 545 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 FEZF2Q8TBJ5 459 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 POP5Q969H6 163 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 COA7Q96BR5 231 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 SPOCK3Q9BQ16 436 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 NAT9Q9BTE0 207 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 BRD7Q9NPI1 651 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 CYTH4Q9UIA0 394 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 SSR3Q9UNL2 185 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 PRSS44E7EML9 344 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 WRBO00258 174 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 HDAC3O15379 428 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 VPS4BO75351 444 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 STX11O75558 287 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 KCNH1O95259 989 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ITGB3P05106 788 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 HOXB6P17509 224 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 SLFN12LQ6IEE8 588 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ARHGAP36Q6ZRI8 547 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 EPHX4Q8IUS5 362 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 ZC3H7AQ8IWR0 971 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 CLYBLQ8N0X4 340 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 IL17REQ8NFR9 667 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 TRNT1Q96Q11 434 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 GFM1Q96RP9 751 aaKnown RBP4.48□□□□□ -1.69
CDH8-205ENST00000577730 CDADC1Q9BWV3 514 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 C1orf21Q9H246 121 aa4.48□□□□□ -1.69
CDH8-205ENST00000577730 SPON1Q9HCB6 807 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms