RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 REXO2Q9Y3B8 237 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-203ENST00000577442 PJA2O43164 708 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 PSTPIP1O43586 416 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 HRO43593 1189 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 KDELR3O43731 214 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 BUB1BO60566 1050 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ZMPSTE24O75844 475 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 DNTTP04053 509 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 C7P10643 843 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 NAP1L1P55209 391 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 KIF5AQ12840 1032 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 SERINC3Q13530 473 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 MAP7D1Q3KQU3 841 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 C9orf64Q5T6V5 341 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 C22orf39Q6P5X5 142 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 LINGO4Q6UY18 593 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 SLC36A4Q6YBV0 504 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 VSIG1Q86XK7 387 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 RHOT1Q8IXI2 618 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 PCDH20Q8N6Y1 951 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 FRS2Q8WU20 508 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 TSC1Q92574 1164 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 HMCESQ96FZ2 354 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CALN1Q9BXU9 219 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 RSPH9Q9H1X1 276 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 NOL6Q9H6R4 1146 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 DDX56Q9NY93 547 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ZNF292O60281 2723 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 RALGAPA1Q6GYQ0 2036 aa12.98□□□□□ -0.33
CDK5RAP3-203ENST00000577442 PI4KAP42356 2102 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 LRRD1A4D1F6 860 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ZNF487B1APH4 448 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 C1QTNF3-AMACRE9PGA6 284 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 DCLK1O15075 740 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 MAP3K13O43283 966 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 BUB1O43683 1085 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 RHOBTB1O94844 696 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ADH1BP00325 375 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 MT-CO1P00395 513 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 COMTP21964 271 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 GLDCP23378 1020 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 OXTRP30559 389 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ARSEP51690 589 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ARF5P84085 180 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 SRSF5Q13243 272 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 DPYSL3Q14195 570 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 LAIR1Q6GTX8 287 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 Q6ZVU0 165 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 DAAM2Q86T65 1068 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CACUL1Q86Y37 369 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CPNE8Q86YQ8 564 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 STK40Q8N2I9 435 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 TPCN2Q8NHX9 752 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 PTPRN2Q92932 1015 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ISG20Q96AZ6 181 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CELF6Q96J87 481 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 DESI2Q9BSY9 194 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 TSGA10Q9BZW7 698 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 SLC6A17Q9H1V8 727 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 LRRC19Q9H756 370 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 USP36Q9P275 1121 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 GMEB2Q9UKD1 530 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CYP8B1Q9UNU6 501 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CACNA1EQ15878 2313 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 KNL1Q8NG31 2342 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CEP250Q9BV73 2442 aa12.97□□□□□ -0.33
CDK5RAP3-203ENST00000577442 RCCD1A6NED2 376 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 PRR23AA6NEV1 266 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 DFFAO00273 331 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 MCF2LO15068 1137 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 IGLV3-19P01714 112 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 KRT1P04264 644 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 AMPD1P23109 780 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 PSMD8P48556 350 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 RPS14P62263 151 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 CST6Q15828 149 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 PLK5Q496M5 336 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 INO80DQ53TQ3 878 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 SPDYCQ5MJ68 293 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 FAM46CQ5VWP2 391 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 AFMIDQ63HM1 303 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 PMS2CLQ68D20 193 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 USP30Q70CQ3 517 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 LPCAT2Q7L5N7 544 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 KBTBD6Q86V97 674 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 LRRC49Q8IUZ0 686 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 LRRC8AQ8IWT6 810 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ARHGAP12Q8IWW6 846 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 NPWQ8N729 165 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 SUMF1Q8NBK3 374 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 RLN3Q8WXF3 142 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 FAF2Q96CS3 445 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 LOXL4Q96JB6 756 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ZC3H10Q96K80 434 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 PABPC3Q9H361 631 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 MTG2Q9H4K7 406 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 SP110Q9HB58 689 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 KLHL11Q9NVR0 708 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 UBA2Q9UBT2 640 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms