RNA–Protein interactions for RNA: ENST00000577241.1

MSI2-205, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-205ENST00000577241 NUP85Q9BW27 656 aa16.08■□□□□ 0.16
MSI2-205ENST00000577241 DHX35Q9H5Z1 703 aaKnown RBP16.08■□□□□ 0.16
MSI2-205ENST00000577241 CD93Q9NPY3 652 aa16.08■□□□□ 0.16
MSI2-205ENST00000577241 UVRAGQ9P2Y5 699 aa16.08■□□□□ 0.16
MSI2-205ENST00000577241 PCSK1NQ9UHG2 260 aa16.08■□□□□ 0.16
MSI2-205ENST00000577241 MEI4A8MW99 385 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 EEF2KO00418 725 aaKnown RBP16.07■□□□□ 0.16
MSI2-205ENST00000577241 DAPK3O43293 454 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 ZMPSTE24O75844 475 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 SEMA4FO95754 770 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 MT-CO1P00395 513 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 GOT1P17174 413 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 HCAR3P49019 387 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 NUMBP49757 651 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 SERPINH1P50454 418 aaKnown RBP16.07■□□□□ 0.16
MSI2-205ENST00000577241 LIMK1P53667 647 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 ADKP55263 362 aaKnown RBP16.07■□□□□ 0.16
MSI2-205ENST00000577241 GFPT1Q06210 699 aaPredicted RBP16.07■□□□□ 0.16
MSI2-205ENST00000577241 TBX2Q13207 712 aaPredicted RBP16.07■□□□□ 0.16
MSI2-205ENST00000577241 SF3A2Q15428 464 aaKnown RBP16.07■□□□□ 0.16
MSI2-205ENST00000577241 CCDC6Q16204 474 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 ASTE1Q2TB18 679 aaPredicted RBP16.07■□□□□ 0.16
MSI2-205ENST00000577241 SLC23A3Q6PIS1 610 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 Q6ZVU0 165 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 FAM124AQ86V42 546 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 UMODL1-AS1Q8N2C9 162 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 DEFB119Q8N690 84 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 ARFGAP1Q8N6T3 406 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 PCDH20Q8N6Y1 951 aaKnown RBP16.07■□□□□ 0.16
MSI2-205ENST00000577241 CASKIN2Q8WXE0 1202 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 ISG20Q96AZ6 181 aaKnown RBP16.07■□□□□ 0.16
MSI2-205ENST00000577241 SNRNP25Q9BV90 132 aaKnown RBP16.07■□□□□ 0.16
MSI2-205ENST00000577241 MAGEB5Q9BZ81 275 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 TRIM7Q9C029 511 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 ANAPC7Q9UJX3 599 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 NENFQ9UMX5 172 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 ABCA7Q8IZY2 2146 aa16.07■□□□□ 0.16
MSI2-205ENST00000577241 SDK1Q7Z5N4 2213 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.06■□□□□ 0.16
MSI2-205ENST00000577241 LRRC72A6NJI9 287 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 MID1O15344 667 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 SLC7A4O43246 635 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 KDELR3O43731 214 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 RNASEH2AO75792 299 aaKnown RBP16.06■□□□□ 0.16
MSI2-205ENST00000577241 PRNPP04156 253 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 SERPINF2P08697 491 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 ACSL1P33121 698 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 PSMD8P48556 350 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 NDST2P52849 883 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 HADHQ16836 314 aaKnown RBP16.06■□□□□ 0.16
MSI2-205ENST00000577241 RSPO4Q2I0M5 234 aaPredicted RBP16.06■□□□□ 0.16
MSI2-205ENST00000577241 TRIM61Q5EBN2 209 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 C22orf39Q6P5X5 142 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 PLPP6Q8IY26 295 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 HDDC3Q8N4P3 179 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 MRFAP1L1Q96HT8 127 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 RTKNQ9BST9 563 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 KDM4CQ9H3R0 1056 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 ZWILCHQ9H900 591 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 NHEJ1Q9H9Q4 299 aaPredicted RBP16.06■□□□□ 0.16
MSI2-205ENST00000577241 TMEM74BQ9NUR3 256 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 NDFIP2Q9NV92 336 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 DLL3Q9NYJ7 618 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 CTTNBP2NLQ9P2B4 639 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 PPM1HQ9ULR3 514 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 SLC6A14Q9UN76 642 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 THADAQ6YHU6 1953 aa16.06■□□□□ 0.16
MSI2-205ENST00000577241 A0A1W2PP55 124 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 TMEM253P0C7T8 217 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 VAV1P15498 845 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 ACVRL1P37023 503 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 ARL4AP40617 200 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 ARF5P84085 180 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 DCAF12L1Q5VU92 463 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 LINGO4Q6UY18 593 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 ZNF354CQ86Y25 554 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 LZTR1Q8N653 840 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 TMIEQ8NEW7 156 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 OR2A12Q8NGT7 310 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 PIP4K2CQ8TBX8 421 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 ZNF564Q8TBZ8 553 aaPredicted RBP16.05■□□□□ 0.16
MSI2-205ENST00000577241 TEKT4Q8WW24 435 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 RBSNQ9H1K0 784 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 NEUROG2Q9H2A3 272 aa16.05■□□□□ 0.16
MSI2-205ENST00000577241 A0A1B0GTW7 788 aa16.04■□□□□ 0.16
MSI2-205ENST00000577241 H3BRJ5 948 aa16.04■□□□□ 0.16
MSI2-205ENST00000577241 K7ERQ8 282 aa16.04■□□□□ 0.16
MSI2-205ENST00000577241 SLC30A4O14863 429 aa16.04■□□□□ 0.16
MSI2-205ENST00000577241 SMAD6O43541 496 aaKnown RBP16.04■□□□□ 0.16
MSI2-205ENST00000577241 BNIP3LO60238 219 aa16.04■□□□□ 0.16
MSI2-205ENST00000577241 CFIP05156 583 aa16.04■□□□□ 0.16
MSI2-205ENST00000577241 SYPP08247 313 aa16.04■□□□□ 0.16
MSI2-205ENST00000577241 GLDCP23378 1020 aa16.04■□□□□ 0.16
MSI2-205ENST00000577241 CHRNA3P32297 505 aa16.04■□□□□ 0.16
MSI2-205ENST00000577241 IRX4P78413 519 aa16.04■□□□□ 0.16
MSI2-205ENST00000577241 DPYSL2Q16555 572 aa16.04■□□□□ 0.16
MSI2-205ENST00000577241 INO80DQ53TQ3 878 aaPredicted RBP16.04■□□□□ 0.16
MSI2-205ENST00000577241 PPP6R3Q5H9R7 873 aaPredicted RBP16.04■□□□□ 0.16
MSI2-205ENST00000577241 RFX8Q6ZV50 586 aa16.04■□□□□ 0.16
MSI2-205ENST00000577241 OR2T34Q8NGX1 318 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms