RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 FBXL22Q6P050 247 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 NEK5Q6P3R8 708 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 IGF2-ASQ6U949 168 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 ABI3BPQ7Z7G0 1075 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 ERCC4Q92889 916 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 BTN2A3PQ96KV6 586 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 DUSP23Q9BVJ7 150 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 USP25Q9UHP3 1055 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 SLC25A13Q9UJS0 675 aa10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 HEMK1Q9Y5R4 338 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-220ENST00000576940 NBPF19A0A087WUL8 3843 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 SYNJ2BP-COX16A0A087WUM0 186 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 EME2A4GXA9 379 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 POM121BA6NF01 834 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 CDRT15L2A8MXV6 281 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 K7ERQ8 282 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 ALOX15BO15296 676 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 IGLV3-25P01717 112 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 CSF2P04141 144 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 SRCP12931 536 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 TBXAS1P24557 533 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 CHRNA3P32297 505 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 SYKP43405 635 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 RPL34P49207 117 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 VASPP50552 380 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 NDUFA8P51970 172 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 HNRNPKP61978 463 aaKnown RBP eCLIP10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 CENPCQ03188 943 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 SRSF6Q13247 344 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 MAPK8IP2Q13387 824 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 EIF4EBP2Q13542 120 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 FGL2Q14314 439 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 FZD2Q14332 565 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 TAF5Q15542 800 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 DEFB133Q30KQ1 61 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 ARSIQ5FYB1 569 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 PERM1Q5SV97 790 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 DENND1BQ6P3S1 775 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 RRAGAQ7L523 313 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 C14orf80Q86SX3 495 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 SH2D3CQ8N5H7 860 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 ATP6V0D2Q8N8Y2 350 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 CHST14Q8NCH0 376 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 ZNF548Q8NEK5 533 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 BOD1L1Q8NFC6 3051 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 OR2A12Q8NGT7 310 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 CCDC97Q96F63 343 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 IFT43Q96FT9 208 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 RPRD1AQ96P16 312 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 CCNL2Q96S94 520 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 USP29Q9HBJ7 922 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 COX16Q9P0S2 106 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 SLC12A6Q9UHW9 1150 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 PCDHGA8Q9Y5G5 932 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 OR51B4Q9Y5P0 310 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 HS3ST3A1Q9Y663 406 aa10.37□□□□□ -0.75
NPLOC4-220ENST00000576940 RP1P56715 2156 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 COL27A1Q8IZC6 1860 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 TCAF2A6NFQ2 919 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 MUSKO15146 869 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 RAD51BO15315 384 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 SPINT1O43278 529 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 SMAD6O43541 496 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 LZTS3O60299 673 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 SNAP91O60641 907 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 ITGB6P18564 788 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 GGCXP38435 758 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 PMS1P54277 932 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 YWHAZP63104 245 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 AUHQ13825 339 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 TGIF1Q15583 401 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 TPRG1LQ5T0D9 272 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 C6orf132Q5T0Z8 1188 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 ANKRD40Q6AI12 368 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 ATL3Q6DD88 541 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 ZCCHC8Q6NZY4 707 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 KRBA2Q6ZNG9 492 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 RBM44Q6ZP01 1051 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 ERN2Q76MJ5 926 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 BEND5Q7L4P6 421 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 PTAR1Q7Z6K3 402 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 PPM1KQ8N3J5 372 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 ARL14Q8N4G2 192 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 ATP11CQ8NB49 1132 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 TMIEQ8NEW7 156 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 WDR36Q8NI36 951 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 LMX1AQ8TE12 382 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 EXTL1Q92935 676 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 SLC35C1Q96A29 364 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 PPP1R9BQ96SB3 815 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 SLC17A9Q9BYT1 436 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 POPDC2Q9HBU9 364 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 EVA1BQ9NVM1 165 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 IPO11Q9UI26 975 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 SALL4Q9UJQ4 1053 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 VPS28Q9UK41 221 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 VANGL2Q9ULK5 521 aa10.36□□□□□ -0.75
NPLOC4-220ENST00000576940 TRPM6Q9BX84 2022 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms