RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 WSB2Q9NYS7 404 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-216ENST00000575599 ANAPC7Q9UJX3 599 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 HS3ST2Q9Y278 367 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.57□□□□□ -0.24
RPAIN-216ENST00000575599 TNRC6BQ9UPQ9 1833 aaKnown RBP13.57□□□□□ -0.24
RPAIN-216ENST00000575599 SSU72P8A0A1W2PR75 194 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 SOWAHDA6NJG2 315 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 MEI4A8MW99 385 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 K7ERQ8 282 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 MID1O15344 667 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 ATP9BO43861 1147 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 RAMP2O60895 175 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 LRCH4O75427 683 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 IL1BP01584 269 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 IGLV3-19P01714 112 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 CYP1A2P05177 515 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 ZNF806P0C7X5 589 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 ACVRL1P37023 503 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 CCZ1BP86790 482 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 CCZ1P86791 482 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-216ENST00000575599 ZBTB16Q05516 673 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 CST6Q15828 149 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 CA9Q16790 459 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 AASDHQ4L235 1098 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-216ENST00000575599 SPDYCQ5MJ68 293 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 PLA2G2CQ5R387 149 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 ERMARDQ5T6L9 678 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 PACSIN1Q9BY11 444 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 PABPC3Q9H361 631 aaKnown RBP13.56□□□□□ -0.24
RPAIN-216ENST00000575599 KCNF1Q9H3M0 494 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 CATSPERBQ9H7T0 1116 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 LUC7LQ9NQ29 371 aaKnown RBP13.56□□□□□ -0.24
RPAIN-216ENST00000575599 NENFQ9UMX5 172 aa13.56□□□□□ -0.24
RPAIN-216ENST00000575599 A0A1W2PP55 124 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 PATE3B3GLJ2 98 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 EEF2KO00418 725 aaKnown RBP13.55□□□□□ -0.24
RPAIN-216ENST00000575599 FECHP22830 423 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 ACSL1P33121 698 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 ETFBP38117 255 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 ARF5P84085 180 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 SEMA3BQ13214 749 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 POLD3Q15054 466 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-216ENST00000575599 SMTNL2Q2TAL5 461 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 ASTE1Q2TB18 679 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-216ENST00000575599 PPP6R3Q5H9R7 873 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-216ENST00000575599 RETSATQ6NUM9 610 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 C22orf39Q6P5X5 142 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 SYT12Q8IV01 421 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 RGL4Q8IZJ4 473 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 TXLNBQ8N3L3 684 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 RTL3Q8N8U3 475 aaKnown RBP13.55□□□□□ -0.24
RPAIN-216ENST00000575599 ZNF564Q8TBZ8 553 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-216ENST00000575599 CTNNBL1Q8WYA6 563 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-216ENST00000575599 OR8D1Q8WZ84 308 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 ARHGEF2Q92974 986 aaKnown RBP13.55□□□□□ -0.24
RPAIN-216ENST00000575599 KCTD15Q96SI1 283 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-216ENST00000575599 FAM129BQ96TA1 746 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 OMDQ99983 421 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 BTBD1Q9H0C5 482 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 RETREG1Q9H6L5 497 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 ZWILCHQ9H900 591 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 TMEM74BQ9NUR3 256 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 SPTLC3Q9NUV7 552 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 FBXL12Q9NXK8 326 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 CTTNBP2NLQ9P2B4 639 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 SERGEFQ9UGK8 458 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 IP6K2Q9UHH9 426 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 NCKAP1Q9Y2A7 1128 aa13.55□□□□□ -0.24
RPAIN-216ENST00000575599 EPN1Q9Y6I3 576 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-216ENST00000575599 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-216ENST00000575599 FGF10O15520 208 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-216ENST00000575599 SMAD6O43541 496 aaKnown RBP13.54□□□□□ -0.24
RPAIN-216ENST00000575599 GDF9O60383 454 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 RNASEH2AO75792 299 aaKnown RBP13.54□□□□□ -0.24
RPAIN-216ENST00000575599 ZMPSTE24O75844 475 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 ADH1BP00325 375 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 TCF4P15884 667 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 SLC8A1P32418 973 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 PCK1P35558 622 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 SERPINH1P50454 418 aaKnown RBP13.54□□□□□ -0.24
RPAIN-216ENST00000575599 PIGHQ14442 188 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-216ENST00000575599 POM121L1PQ3SYA9 428 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 KCNT1Q5JUK3 1230 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 SYCP2LQ5T4T6 812 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 DCAF12L1Q5VU92 463 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 LEKR1Q6ZMV7 388 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 CYP4V2Q6ZWL3 525 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-216ENST00000575599 DSG4Q86SJ6 1040 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 TMEM139Q8IV31 216 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 SNX19Q92543 992 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 HSPH1Q92598 858 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 FOXJ1Q92949 421 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 ZNF419Q96HQ0 510 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-216ENST00000575599 CCDC114Q96M63 670 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 NCAPGQ9BPX3 1015 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 ACE2Q9BYF1 805 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-216ENST00000575599 MAGEH1Q9H213 219 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 TNKS2Q9H2K2 1166 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 RXFP3Q9NSD7 469 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 PILRBQ9UKJ0 227 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms