RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 MAML1Q92585 1016 aa24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 AGAP3Q96P47 875 aa24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 PHF7Q9BWX1 381 aaPredicted RBP24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 GDF3Q9NR23 364 aa24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 GTSE1Q9NYZ3 720 aa24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 HPCAL4Q9UM19 191 aa24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 COL4A3Q01955 1670 aa24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 F5H423 210 aaPredicted RBP24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 TRIM24O15164 1050 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 CHADO15335 359 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 CACNG3O60359 315 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 ZNF189O75820 626 aaPredicted RBP24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 SMAD2Q15796 467 aaKnown RBP24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 ARHGEF18Q6ZSZ5 1173 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 CPA6Q8N4T0 437 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 DNAJC17Q9NVM6 304 aaKnown RBP24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 PAK5Q9P286 719 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 GGA2Q9UJY4 613 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 INTS6Q9UL03 887 aaKnown RBP24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 OPHN1O60890 802 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 VSNL1P62760 191 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 TFF2Q03403 129 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 SLC10A7Q0GE19 358 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 RUNX3Q13761 415 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 GAB4Q2WGN9 574 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 TEX44Q53QW1 395 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 PTCRAQ6ISU1 281 aaPredicted RBP24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 FATE1Q969F0 183 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 SNF8Q96H20 258 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 IL12RB2Q99665 862 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 GRHL1Q9NZI5 618 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 VPS51Q9UID3 782 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 RAB21Q9UL25 225 aa24.52■■□□□ 1.52
ATPAF1-213ENST00000574428 ZBTB24O43167 697 aaPredicted RBP24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 ZMPSTE24O75844 475 aa24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 CARSP49589 748 aaKnown RBP24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 ARF5P84085 180 aa24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 PLEKHG6Q3KR16 790 aa24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 FUT11Q495W5 492 aa24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 PITRM1Q5JRX3 1037 aa24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 FAXCQ5TGI0 409 aa24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 LINGO4Q6UY18 593 aa24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 PID1Q7Z2X4 250 aa24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 CNTD1Q8N815 330 aa24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 DCAF4L2Q8NA75 395 aa24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 XPO6Q96QU8 1125 aaKnown RBP24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 SLC2A11Q9BYW1 496 aa24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 RBM22Q9NW64 420 aaKnown RBP eCLIP24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 ZNF446Q9NWS9 450 aa24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 TTLL3Q9Y4R7 772 aa24.51■■□□□ 1.51
ATPAF1-213ENST00000574428 METTL18O95568 372 aa24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 PABPC1P11940 636 aaKnown RBP24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 AAK1Q2M2I8 961 aa24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 MARC1Q5VT66 337 aa24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 IZUMO3Q5VZ72 239 aa24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 ZNF557Q8N988 423 aaPredicted RBP24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 NSMCE1Q8WV22 266 aa24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 VAT1Q99536 393 aa24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 C2orf49Q9BVC5 232 aaPredicted RBP24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 PRDM6Q9NQX0 595 aa24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 RAB6BQ9NRW1 208 aa24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 UBA2Q9UBT2 640 aaPredicted RBP24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 LIMD1Q9UGP4 676 aa24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 TRHDEQ9UKU6 1024 aa24.5■■□□□ 1.51
ATPAF1-213ENST00000574428 ARNTLO00327 626 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 TULP3O75386 442 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 SEC31AO94979 1220 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 HLA-DQB2P05538 268 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 RENBPP51606 427 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 BASP1P80723 227 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 SLC12A1Q13621 1099 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 HNRNPDQ14103 355 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 LBRQ14739 615 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 TMCO4Q5TGY1 634 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 ETFBKMTQ8IXQ9 262 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 GSPT2Q8IYD1 628 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 MAFAQ8NHW3 353 aaPredicted RBP24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 RUBCNQ92622 972 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 LRRC45Q96CN5 670 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 TEKT5Q96M29 485 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 BRD9Q9H8M2 597 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 FAM114A2Q9NRY5 505 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 FBXO10Q9UK96 956 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 NEBLO76041 1014 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 CD68P34810 354 aaPredicted RBP24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 MMP13P45452 471 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 SLC6A11P48066 632 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 DGKGP49619 791 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 PLK1P53350 603 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 DRG2P55039 364 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 NR1H3Q13133 447 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 SYCP2LQ5T4T6 812 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 WDR93Q6P2C0 686 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 ZNF599Q96NL3 588 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 NT5MQ9NPB1 228 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 RSPH14Q9UHP6 348 aa24.49■■□□□ 1.51
ATPAF1-213ENST00000574428 DNALI1O14645 258 aaPredicted RBP24.48■■□□□ 1.51
ATPAF1-213ENST00000574428 CISD3P0C7P0 127 aa24.48■■□□□ 1.51
ATPAF1-213ENST00000574428 NFKB1P19838 968 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms