RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 SCNN1GP51170 649 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 GJA9P57773 515 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 CDC16Q13042 620 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 POU6F1Q14863 301 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 RNF220Q5VTB9 566 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 RNF111Q6ZNA4 994 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 KDELC2Q7Z4H8 507 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 SPATA6LQ8N4H0 392 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 PHC3Q8NDX5 983 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 ZSCAN18Q8TBC5 510 aaPredicted RBP11.42□□□□□ -0.58
RPAIN-212ENST00000573126 HASPINQ8TF76 798 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 S100A14Q9HCY8 104 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 FAM105AQ9NUU6 356 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 SCOCQ9UIL1 159 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 TRHDEQ9UKU6 1024 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 MTSS1O43312 755 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 EPHA3P29320 983 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 PSEN1P49768 467 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 TBL3Q12788 808 aaKnown RBP11.42□□□□□ -0.58
RPAIN-212ENST00000573126 ASPHQ12797 758 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 CDH17Q12864 832 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 USP10Q14694 798 aaKnown RBP11.42□□□□□ -0.58
RPAIN-212ENST00000573126 TMCO4Q5TGY1 634 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 ZC3HC1Q86WB0 502 aaKnown RBP11.42□□□□□ -0.58
RPAIN-212ENST00000573126 SPNS2Q8IVW8 549 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 DENND6AQ8IWF6 608 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 IPMKQ8NFU5 416 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 ACTRT2Q8TDY3 377 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 MYLPFQ96A32 169 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 PGAP3Q96FM1 320 aaPredicted RBP11.42□□□□□ -0.58
RPAIN-212ENST00000573126 SMARCD1Q96GM5 515 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 LENG8Q96PV6 779 aaPredicted RBP11.42□□□□□ -0.58
RPAIN-212ENST00000573126 TSPAN18Q96SJ8 248 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 ECSITQ9BQ95 431 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 VCXQ9H320 206 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 GPAMQ9HCL2 828 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 TCF7L2Q9NQB0 619 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 TLK1Q9UKI8 766 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 ST3GAL5Q9UNP4 418 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 PDCD11Q14690 1871 aaKnown RBP11.42□□□□□ -0.58
RPAIN-212ENST00000573126 TSC2P49815 1807 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 SHROOM3Q8TF72 1996 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 CCNT2O60583 730 aaKnown RBP11.41□□□□□ -0.58
RPAIN-212ENST00000573126 ZCCHC18P0CG32 403 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 COX4I1P13073 169 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 GABRB3P28472 473 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 CXCR3P49682 368 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 CPT1AP50416 773 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 KLF10Q13118 480 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 CTBP1Q13363 440 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 CCNIQ14094 377 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 LBRQ14739 615 aaKnown RBP11.41□□□□□ -0.58
RPAIN-212ENST00000573126 TIGD5Q53EQ6 642 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 PPM1LQ5SGD2 360 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 NAPEPLDQ6IQ20 393 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 SCAMP5Q8TAC9 235 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 KCTD4Q8WVF5 259 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 SCYL1Q96KG9 808 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 MCMBPQ9BTE3 642 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 FTHL17Q9BXU8 183 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 OXSMQ9NWU1 459 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 POMPQ9Y244 141 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 SSX2IPQ9Y2D8 614 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 RAD54BQ9Y620 910 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 MAGEB16A2A368 324 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 ARL5CA6NH57 179 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 FKBP6O75344 327 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 F9P00740 461 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 AHSGP02765 367 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 SBK3P0C264 359 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 GRIA4P48058 902 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 NPY2RP49146 381 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 NAGLUP54802 743 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 MAP2K5Q13163 448 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 ANO4Q32M45 955 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 ARL13AQ5H913 290 aaPredicted RBP11.41□□□□□ -0.58
RPAIN-212ENST00000573126 LPCAT4Q643R3 524 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 OR52E8Q6IFG1 317 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 PGM2L1Q6PCE3 622 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 DHDDSQ86SQ9 333 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 TMEM86AQ8N2M4 240 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 SREK1Q8WXA9 508 aaKnown RBP11.41□□□□□ -0.58
RPAIN-212ENST00000573126 GATA6Q92908 595 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 GPR22Q99680 433 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 NUF2Q9BZD4 464 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 ILKAPQ9H0C8 392 aaPredicted RBP11.41□□□□□ -0.58
RPAIN-212ENST00000573126 AP5M1Q9H0R1 490 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 ATXN3LQ9H3M9 355 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 SLC38A7Q9NVC3 462 aa11.41□□□□□ -0.58
RPAIN-212ENST00000573126 AIM2O14862 343 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 BUD23O43709 281 aaKnown RBP11.4□□□□□ -0.58
RPAIN-212ENST00000573126 VAPBO95292 243 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 SLC35E2BP0CK96 405 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 CSE1LP55060 971 aaKnown RBP11.4□□□□□ -0.58
RPAIN-212ENST00000573126 MPP1Q00013 466 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 FSCBQ5H9T9 825 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 INTS6LQ5JSJ4 861 aaKnown RBP11.4□□□□□ -0.58
RPAIN-212ENST00000573126 TMEM198Q66K66 360 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 SLC41A1Q8IVJ1 513 aa11.4□□□□□ -0.58
RPAIN-212ENST00000573126 TMEM151AQ8N4L1 468 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms