RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 FAM43BQ6ZT52 329 aaPredicted RBP16.58■□□□□ 0.24
POLR2A-201ENST00000572844 SCN4BQ8IWT1 228 aa16.58■□□□□ 0.24
POLR2A-201ENST00000572844 CNTN4Q8IWV2 1026 aa16.58■□□□□ 0.24
POLR2A-201ENST00000572844 SLC43A3Q8NBI5 491 aa16.58■□□□□ 0.24
POLR2A-201ENST00000572844 PRR11Q96HE9 360 aaPredicted RBP16.58■□□□□ 0.24
POLR2A-201ENST00000572844 GLT1D1Q96MS3 346 aa16.58■□□□□ 0.24
POLR2A-201ENST00000572844 FTHL17Q9BXU8 183 aa16.58■□□□□ 0.24
POLR2A-201ENST00000572844 CADM1Q9BY67 442 aaKnown RBP16.58■□□□□ 0.24
POLR2A-201ENST00000572844 ENTPD7Q9NQZ7 604 aa16.58■□□□□ 0.24
POLR2A-201ENST00000572844 TBC1D13Q9NVG8 400 aa16.58■□□□□ 0.24
POLR2A-201ENST00000572844 DONSONQ9NYP3 566 aa16.58■□□□□ 0.24
POLR2A-201ENST00000572844 MID2Q9UJV3 735 aa16.58■□□□□ 0.24
POLR2A-201ENST00000572844 C2orf71A6NGG8 1288 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 GSC2O15499 205 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 MSI1O43347 362 aaKnown RBP16.57■□□□□ 0.24
POLR2A-201ENST00000572844 H2AFYO75367 372 aaKnown RBP16.57■□□□□ 0.24
POLR2A-201ENST00000572844 APOA4P06727 396 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 CCNG1P51959 295 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 IRX4P78413 519 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 MBTPS1Q14703 1052 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 E2F5Q15329 346 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 DENND5AQ6IQ26 1287 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 ZCCHC23Q6ZST2 131 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 ALYREFQ86V81 257 aaKnown RBP16.57■□□□□ 0.24
POLR2A-201ENST00000572844 C10orf107Q8IVU9 208 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 USP33Q8TEY7 942 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 PPP4R1Q8TF05 950 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 GPR22Q99680 433 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 APOL2Q9BQE5 337 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 ABI2Q9NYB9 513 aaPredicted RBP16.57■□□□□ 0.24
POLR2A-201ENST00000572844 PPARGC1AQ9UBK2 798 aaKnown RBP16.57■□□□□ 0.24
POLR2A-201ENST00000572844 A0A096LPK6 155 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 FAM92AA1XBS5 289 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 ITM2AO43736 263 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 SIN3BO75182 1162 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 OR4Q2P0C623 313 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 RALBP11234 206 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 TPH1P17752 444 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 KCNA4P22459 653 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 NDST2P52849 883 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 UGP2Q16851 508 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 CMC1Q7Z7K0 106 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 TTC7BQ86TV6 843 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 UMODL1-AS1Q8N2C9 162 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 ENDOVQ8N8Q3 282 aaKnown RBP16.57■□□□□ 0.24
POLR2A-201ENST00000572844 VPS39Q96JC1 886 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.57■□□□□ 0.24
POLR2A-201ENST00000572844 RHOJQ9H4E5 214 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 RNPEPL1Q9HAU8 725 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 IARS2Q9NSE4 1012 aaKnown RBP16.57■□□□□ 0.24
POLR2A-201ENST00000572844 DNAJC28Q9NX36 388 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 UBP1Q9NZI7 540 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 DNAJC16Q9Y2G8 782 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 PCDHB5Q9Y5E4 795 aa16.57■□□□□ 0.24
POLR2A-201ENST00000572844 GYG2O15488 501 aa16.56■□□□□ 0.24
POLR2A-201ENST00000572844 LMNAP02545 664 aaKnown RBP16.56■□□□□ 0.24
POLR2A-201ENST00000572844 MYL4P12829 197 aa16.56■□□□□ 0.24
POLR2A-201ENST00000572844 ABCE1P61221 599 aaKnown RBP16.56■□□□□ 0.24
POLR2A-201ENST00000572844 MRPL58Q14197 206 aaKnown RBP16.56■□□□□ 0.24
POLR2A-201ENST00000572844 ACBD5Q5T8D3 534 aaPredicted RBP16.56■□□□□ 0.24
POLR2A-201ENST00000572844 ZNF683Q8IZ20 524 aa16.56■□□□□ 0.24
POLR2A-201ENST00000572844 RDH11Q8TC12 318 aa16.56■□□□□ 0.24
POLR2A-201ENST00000572844 ZNF778Q96MU6 729 aa16.56■□□□□ 0.24
POLR2A-201ENST00000572844 PGLYRP2Q96PD5 576 aa16.56■□□□□ 0.24
POLR2A-201ENST00000572844 SORT1Q99523 831 aa16.56■□□□□ 0.24
POLR2A-201ENST00000572844 CCDC106Q9BWC9 280 aa16.56■□□□□ 0.24
POLR2A-201ENST00000572844 ELAC1Q9H777 363 aaKnown RBP16.56■□□□□ 0.24
POLR2A-201ENST00000572844 OSER1Q9NX31 292 aa16.56■□□□□ 0.24
POLR2A-201ENST00000572844 TMEM161AQ9NX61 479 aa16.56■□□□□ 0.24
POLR2A-201ENST00000572844 TAS2R1Q9NYW7 299 aa16.56■□□□□ 0.24
POLR2A-201ENST00000572844 SRRDQ9UH36 339 aa16.56■□□□□ 0.24
POLR2A-201ENST00000572844 L3MBTL1Q9Y468 752 aa16.56■□□□□ 0.24
POLR2A-201ENST00000572844 OR6C75A6NL08 312 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 TMEM114B3SHH9 223 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 PEX11AO75192 247 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 C2P06681 752 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 KITP10721 976 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 RHOQP17081 205 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 HOXD10P28358 340 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 OR1G1P47890 313 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 PRKAA2P54646 552 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 C14orf80Q86SX3 495 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 ZC3HC1Q86WB0 502 aaKnown RBP16.55■□□□□ 0.24
POLR2A-201ENST00000572844 ARHGAP24Q8N264 748 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 PPHLN1Q8NEY8 458 aaKnown RBP16.55■□□□□ 0.24
POLR2A-201ENST00000572844 SPATA22Q8NHS9 363 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 SREK1Q8WXA9 508 aaKnown RBP16.55■□□□□ 0.24
POLR2A-201ENST00000572844 ZNF419Q96HQ0 510 aaPredicted RBP16.55■□□□□ 0.24
POLR2A-201ENST00000572844 ANKRD27Q96NW4 1050 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 FAM193BQ96PV7 902 aaPredicted RBP16.55■□□□□ 0.24
POLR2A-201ENST00000572844 PRDM5Q9NQX1 630 aaPredicted RBP16.55■□□□□ 0.24
POLR2A-201ENST00000572844 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.55■□□□□ 0.24
POLR2A-201ENST00000572844 RBM22Q9NW64 420 aaKnown RBP eCLIP16.55■□□□□ 0.243e-7■□□□□ 8.5
POLR2A-201ENST00000572844 COMMD8Q9NX08 183 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 MARCOQ9UEW3 520 aaPredicted RBP16.55■□□□□ 0.24
POLR2A-201ENST00000572844 TAGLN3Q9UI15 199 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 PCDHB12Q9Y5F1 795 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 ANP32DO95626 131 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 HLA-DQB2P05538 268 aa16.55■□□□□ 0.24
POLR2A-201ENST00000572844 COL6A2P12110 1019 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms