RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 PAEPP09466 180 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 NME1P15531 152 aaKnown RBP11.64□□□□□ -0.55
CHMP6-202ENST00000571457 TBXAS1P24557 533 aaPredicted RBP11.64□□□□□ -0.55
CHMP6-202ENST00000571457 NR0B2Q15466 257 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 CNGA2Q16280 664 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 ZNF542PQ5EBM4 170 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 RABGAP1LQ5R372 815 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 PIP5KL1Q5T9C9 394 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 RAP1GAP2Q684P5 730 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 GUSBP11Q6P575 273 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 Q6ZVU0 165 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 CCAR2Q8N163 923 aaKnown RBP11.64□□□□□ -0.55
CHMP6-202ENST00000571457 SLC22A18ASQ8N1D0 253 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 ATP6V0D2Q8N8Y2 350 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 NAT6Q93015 286 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 FAM149B1Q96BN6 582 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 IL12RB2Q99665 862 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 FZD3Q9NPG1 666 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 ANKMY1Q9P2S6 941 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 IPO11Q9UI26 975 aaKnown RBP11.64□□□□□ -0.55
CHMP6-202ENST00000571457 PCDHGA7Q9Y5G6 932 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 CENPEQ02224 2701 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 TRPM6Q9BX84 2022 aa11.64□□□□□ -0.55
CHMP6-202ENST00000571457 UTP20O75691 2785 aaKnown RBP11.63□□□□□ -0.55
CHMP6-202ENST00000571457 SPTY2D1-AS1A0A0U1RR47 76 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 TMX2-CTNND1H3BSU7 103 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 M0QYV0 167 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 KPNA3O00505 521 aaPredicted RBP11.63□□□□□ -0.55
CHMP6-202ENST00000571457 AQP9O43315 295 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 ACTN4O43707 911 aaKnown RBP11.63□□□□□ -0.55
CHMP6-202ENST00000571457 BNIP3LO60238 219 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 GABBR2O75899 941 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 PRNPP04156 253 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 RABIFP47224 123 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 CLDN2P57739 230 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 EIF3IQ13347 325 aaKnown RBP11.63□□□□□ -0.55
CHMP6-202ENST00000571457 SPIDRQ14159 915 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 LINC00303Q3SY05 128 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 GCNT7Q6ZNI0 430 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 BEND5Q7L4P6 421 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 C14orf80Q86SX3 495 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 TAC4Q86UU9 113 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 PARGQ86W56 976 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 TMIEQ8NEW7 156 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 EXTL1Q92935 676 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 LIN37Q96GY3 246 aaPredicted RBP11.63□□□□□ -0.55
CHMP6-202ENST00000571457 NOX5Q96PH1 765 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 MIS12Q9H081 205 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.63□□□□□ -0.55
CHMP6-202ENST00000571457 USP25Q9UHP3 1055 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 VPS28Q9UK41 221 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 PCDHA7Q9UN72 937 aa11.63□□□□□ -0.55
CHMP6-202ENST00000571457 KCNU1A8MYU2 1149 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 PLD2O14939 933 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 MUSKO15146 869 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 EFSO43281 561 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 PPFIA2O75334 1257 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 FYNP06241 537 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 SLC2A3P11169 496 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 EPB41P11171 864 aaKnown RBP11.62□□□□□ -0.55
CHMP6-202ENST00000571457 GP1BBP13224 206 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 ITGB6P18564 788 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 CHRNA3P32297 505 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 FZD2Q14332 565 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 EDRF1Q3B7T1 1238 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 ZC3H12AQ5D1E8 599 aaKnown RBP11.62□□□□□ -0.55
CHMP6-202ENST00000571457 OR6B2Q6IFH4 312 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 TMEM270Q6UE05 265 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 CRTC1Q6UUV9 634 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 KYAT3Q6YP21 454 aaKnown RBP11.62□□□□□ -0.55
CHMP6-202ENST00000571457 ZSCAN30Q86W11 494 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 GUF1Q8N442 669 aaKnown RBP11.62□□□□□ -0.55
CHMP6-202ENST00000571457 SH2D3CQ8N5H7 860 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 ZSCAN1Q8NBB4 408 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 CLEC4CQ8WTT0 213 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 BTN2A2Q8WVV5 523 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 PPP1R16AQ96I34 528 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 FEM1AQ9BSK4 669 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 STRADBQ9C0K7 418 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 GPR27Q9NS67 375 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 XPO7Q9UIA9 1087 aaKnown RBP11.62□□□□□ -0.55
CHMP6-202ENST00000571457 ACSL6Q9UKU0 697 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 NAALADL1Q9UQQ1 740 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 COQ4Q9Y3A0 265 aa11.62□□□□□ -0.55
CHMP6-202ENST00000571457 PMS2P1A4D2B8 440 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 CETN3O15182 167 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 RHOBTB3O94955 611 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 FAM87AP0C7U9 286 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 JUNDP17535 347 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 SLC5A2P31639 672 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 ACADSBP45954 432 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 NUMBP49757 651 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 RPS21P63220 83 aaKnown RBP11.61□□□□□ -0.55
CHMP6-202ENST00000571457 NFKB2Q00653 900 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 TLE1Q04724 770 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 MTA1Q13330 715 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 UBAP2LQ14157 1087 aaKnown RBP11.61□□□□□ -0.55
CHMP6-202ENST00000571457 DEFB133Q30KQ1 61 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 TMEM259Q4ZIN3 620 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms