RNA–Protein interactions for RNA: ENST00000569108.5

SPIRE2-210, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 1 (best)

Gene SPIRE2, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-210ENST00000569108 CDKL3Q8IVW4 592 aaPredicted RBP18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 SLC39A11Q8N1S5 342 aa18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 ZNF558Q96NG5 402 aa18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 MRPL42Q9Y6G3 142 aaKnown RBP18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 ZNF638Q14966 1978 aaKnown RBP18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 NDC80O14777 642 aa18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 EFCAB14O75071 495 aa18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 TTC4O95801 387 aa18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 SOD2P04179 222 aa18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 TROVE2P10155 538 aaKnown RBP eCLIP18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 GAD2Q05329 585 aa18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 QKIQ96PU8 341 aaKnown RBP eCLIP18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 LGMNQ99538 433 aa18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 CLSTN3Q9BQT9 956 aa18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 OSBPL2Q9H1P3 480 aa18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 PTTG2Q9NZH5 202 aa18.54■□□□□ 0.56
SPIRE2-210ENST00000569108 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 GOLGA8MH3BSY2 632 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 LRIG2O94898 1065 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 ACSL3O95573 720 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 PORP16435 677 aaPredicted RBP18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 BASP1P80723 227 aaKnown RBP18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 TAF10Q12962 218 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 ACSBG2Q5FVE4 666 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 C16orf59Q7L2K0 433 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 TP53INP2Q8IXH6 220 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 FBXO32Q969P5 355 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 GRAMD1AQ96CP6 724 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 TGS1Q96RS0 853 aaKnown RBP18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 MLXIPLQ9NP71 852 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 NINJ2Q9NZG7 142 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 PAK5Q9P286 719 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 NR2E3Q9Y5X4 410 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 BIRC5O15392 142 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 PSMG1O95456 288 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 HSPA1AP0DMV8 641 aaKnown RBP18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 HSPA1BP0DMV9 641 aaKnown RBP18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 CDK4P11802 303 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 CREB1P16220 341 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 CCR1P32246 355 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 MAGEA4P43358 317 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 RASSF2P50749 326 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 BRMS1LQ5PSV4 323 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 NANOGNBQ7Z5D8 188 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 CMTR2Q8IYT2 770 aaKnown RBP18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 ST13P4Q8IZP2 240 aaPredicted RBP18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 CCDC110Q8TBZ0 833 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 GIPC2Q8TF65 315 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 TFB1MQ8WVM0 346 aaKnown RBP18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 TMEM169Q96HH4 297 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 C9orf72Q96LT7 481 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 TBCCD1Q9NVR7 557 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 STX18Q9P2W9 335 aaKnown RBP18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 ZNF711Q9Y462 761 aa18.53■□□□□ 0.56
SPIRE2-210ENST00000569108 RASGRF2O14827 1237 aa18.52■□□□□ 0.56
SPIRE2-210ENST00000569108 ATF6P18850 670 aa18.52■□□□□ 0.56
SPIRE2-210ENST00000569108 GRIA2P42262 883 aa18.52■□□□□ 0.56
SPIRE2-210ENST00000569108 RPL10AP62906 217 aaKnown RBP18.52■□□□□ 0.56
SPIRE2-210ENST00000569108 MAP7D1Q3KQU3 841 aa18.52■□□□□ 0.56
SPIRE2-210ENST00000569108 MSANTD2Q6P1R3 559 aa18.52■□□□□ 0.56
SPIRE2-210ENST00000569108 ZNF449Q6P9G9 518 aa18.52■□□□□ 0.56
SPIRE2-210ENST00000569108 SIK2Q9H0K1 926 aa18.52■□□□□ 0.56
SPIRE2-210ENST00000569108 SAYSD1Q9NPB0 183 aa18.52■□□□□ 0.56
SPIRE2-210ENST00000569108 HACD1B0YJ81 288 aa18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 LSM1O15116 133 aaKnown RBP18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 TMEM63AO94886 807 aa18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 TBX18O95935 607 aa18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 PTPN4P29074 926 aa18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 ZNF135P52742 658 aaPredicted RBP18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 GEMIN4P57678 1058 aaKnown RBP18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 PPP2R5DQ14738 602 aa18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 SDR16C5Q8N3Y7 309 aa18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 COLGALT1Q8NBJ5 622 aa18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 GDAP1Q8TB36 358 aa18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 SERPINB11Q96P15 392 aa18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 LRRC37BQ96QE4 947 aa18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 IL23AQ9NPF7 189 aa18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 RAB6BQ9NRW1 208 aa18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 ZNF212Q9UDV6 495 aa18.52■□□□□ 0.55
SPIRE2-210ENST00000569108 MYO16Q9Y6X6 1858 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 SMIM31A0A1B0GVY4 71 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 KCNU1A8MYU2 1149 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 PAGE1O75459 146 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 GCATO75600 419 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 BAIAP3O94812 1187 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 CBX6O95503 412 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 DSG1Q02413 1049 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 HEATR6Q6AI08 1181 aaKnown RBP18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 GAB3Q8WWW8 586 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 HTR3CQ8WXA8 447 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 MIPEPQ99797 713 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 PRDM12Q9H4Q4 367 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 CLIC5Q9NZA1 410 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 PLXNA3P51805 1871 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 SRGAP2BP0DMP2 458 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 LAG3P18627 525 aa18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 CYLC2Q14093 348 aaPredicted RBP18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 FASTKD3Q14CZ7 662 aaKnown RBP18.51■□□□□ 0.55
SPIRE2-210ENST00000569108 PDK1Q15118 436 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms