RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 BIRC5O15392 142 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 GLRA3O75311 464 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 GEMP55040 296 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 RPL10AP62906 217 aaKnown RBP18.46■□□□□ 0.55
SMPD3-211ENST00000568373 HSP90AA5PQ58FG0 334 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 NLRP9Q7RTR0 991 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 TFAP2DQ7Z6R9 452 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 STRA8Q7Z7C7 330 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 NUDCD3Q8IVD9 361 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 IPMKQ8NFU5 416 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 RFWD2Q8NHY2 731 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 RAB3IL1Q8TBN0 382 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 E2F7Q96AV8 911 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 AGAP2Q99490 1192 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 HIPK3Q9H422 1215 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 DCTN4Q9UJW0 460 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 IGLV3-27P01718 113 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 BPGMP07738 259 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 SPRP35270 261 aaPredicted RBP18.45■□□□□ 0.54
SMPD3-211ENST00000568373 SKIV2L2P42285 1042 aaKnown RBP18.45■□□□□ 0.54
SMPD3-211ENST00000568373 LIMK2P53671 638 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 CCL23P55773 120 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 ATG16L1Q676U5 607 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 PRSS55Q6UWB4 352 aaPredicted RBP18.45■□□□□ 0.54
SMPD3-211ENST00000568373 KCNMB4Q86W47 210 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 ISL2Q96A47 359 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 C20orf96Q9NUD7 363 aaPredicted RBP18.45■□□□□ 0.54
SMPD3-211ENST00000568373 DCDC2Q9UHG0 476 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 CDY1Q9Y6F8 540 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 NEBLO76041 1014 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 CNTN5O94779 1100 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 PEX11BO96011 259 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 ZDHHC11BP0C7U3 371 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 NMBRP28336 390 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 ADRA1AP35348 466 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 TMPRSS15P98073 1019 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 BST1Q10588 318 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 CHI3L2Q15782 390 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 ALFQ53S48 1182 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 FATE1Q969F0 183 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 C7orf26Q96N11 449 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 OGDHLQ9ULD0 1010 aa18.45■□□□□ 0.54
SMPD3-211ENST00000568373 SLC12A8A0AV02 714 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 TYK2P29597 1187 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 MAGEA12P43365 314 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 RING1Q06587 406 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 HNRNPDQ14103 355 aaKnown RBP18.44■□□□□ 0.54
SMPD3-211ENST00000568373 DBN1Q16643 649 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 PCID2Q5JVF3 399 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 RAP1GAP2Q684P5 730 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 DENND5AQ6IQ26 1287 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 FBXL22Q6P050 247 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 CCDC117Q8IWD4 279 aaPredicted RBP18.44■□□□□ 0.54
SMPD3-211ENST00000568373 DCLK2Q8N568 766 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 GIPC2Q8TF65 315 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 HMCESQ96FZ2 354 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 FICDQ9BVA6 458 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 ENTPD7Q9NQZ7 604 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 EMCNQ9ULC0 261 aa18.44■□□□□ 0.54
SMPD3-211ENST00000568373 MICAL3Q7RTP6 2002 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 A0A0G2JND7 137 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 UNC5CO95185 931 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 PARNO95453 639 aaKnown RBP18.43■□□□□ 0.54
SMPD3-211ENST00000568373 DLDP09622 509 aaKnown RBP18.43■□□□□ 0.54
SMPD3-211ENST00000568373 ATF6P18850 670 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 ATN1P54259 1190 aaPredicted RBP18.43■□□□□ 0.54
SMPD3-211ENST00000568373 INSCQ1MX18 579 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 ACBD5Q5T8D3 534 aaPredicted RBP18.43■□□□□ 0.54
SMPD3-211ENST00000568373 N4BP2L1Q5TBK1 243 aaPredicted RBP18.43■□□□□ 0.54
SMPD3-211ENST00000568373 FSTL4Q6MZW2 842 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 PKN3Q6P5Z2 889 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 CYB5D1Q6P9G0 228 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 FBXO22Q8NEZ5 403 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 IGSF8Q969P0 613 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 ZNF778Q96MU6 729 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 SNX15Q9NRS6 342 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 CCDC195A0A1B0GUA6 201 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 SLC38A8A6NNN8 435 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 TLR5O60602 858 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 PMPCBO75439 489 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 GSRP00390 522 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 HMBSP08397 361 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 ALDH7A1P49419 539 aaKnown RBP18.43■□□□□ 0.54
SMPD3-211ENST00000568373 SERPINB8P50452 374 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 RENBPP51606 427 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 CSE1LP55060 971 aaKnown RBP18.43■□□□□ 0.54
SMPD3-211ENST00000568373 MPP3Q13368 585 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 PPM1JQ5JR12 505 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 SPDYAQ5MJ70 313 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 CES4AQ5XG92 561 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 PDPK2PQ6A1A2 396 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 SLC8B1Q6J4K2 584 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 C16orf46Q6P387 395 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 ANKRD33Q7Z3H0 272 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 AZIN2Q96A70 460 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 KLHL29Q96CT2 875 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 TTLL2Q9BWV7 592 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 FSD1LQ9BXM9 530 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 PPP1R12CQ9BZL4 782 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 UBE2OQ9C0C9 1292 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms