RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 NOTUMQ6P988 496 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 FOXR2Q6PJQ5 311 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 KDELC2Q7Z4H8 507 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 C12orf56Q8IXR9 622 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 DNAAF3Q8N9W5 541 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 HAS1Q92839 578 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 MTMR9Q96QG7 549 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 ADAM2Q99965 735 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 BRD9Q9H8M2 597 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 TMEM9Q9P0T7 183 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 SNX9Q9Y5X1 595 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 FER1L6Q2WGJ9 1857 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 PRRG1O14668 218 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 TSPAN4O14817 238 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 NUDT17P0C025 328 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 EPHB2P29323 1055 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 CHKAP35790 457 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 GSSP48637 474 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 KCNMA1Q12791 1236 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 PLCL1Q15111 1095 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 PKN2Q16513 984 aaKnown RBP6.07□□□□□ -1.44
CNOT1-211ENST00000567188 HIF1AQ16665 826 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 FKBP9P1Q75LS8 142 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 CKAP2Q8WWK9 683 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.07□□□□□ -1.445e-7■■□□□ 13.8
CNOT1-211ENST00000567188 AKAP11Q9UKA4 1901 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 CCL16O15467 120 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 TLL1O43897 1013 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 NADKO95544 446 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-211ENST00000567188 RPLP2P05387 115 aaKnown RBP6.07□□□□□ -1.44
CNOT1-211ENST00000567188 POU1F1P28069 291 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 ZNF844Q08AG5 666 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 FOXD4Q12950 439 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-211ENST00000567188 MXD4Q14582 209 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-211ENST00000567188 HSDL1Q3SXM5 330 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 MDH1BQ5I0G3 518 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 NECAB2Q7Z6G3 386 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 DHRSXQ8N5I4 330 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 MED30Q96HR3 178 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 TSEN34Q9BSV6 310 aaKnown RBP6.07□□□□□ -1.44
CNOT1-211ENST00000567188 TMEM120AQ9BXJ8 343 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 ABHD16BQ9H3Z7 469 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 RUBCNLQ9H714 662 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 ALOX12P18054 663 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 CNTFP26441 200 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 PBX3P40426 434 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 HK2P52789 917 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 PTPAQ15257 358 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 SNRNP35Q16560 246 aaKnown RBP6.07□□□□□ -1.44
CNOT1-211ENST00000567188 FAM110CQ1W6H9 321 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 SLC35G1Q2M3R5 365 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 KIF19Q2TAC6 998 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 CHMP1BQ7LBR1 199 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 TMEM199Q8N511 208 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 NARS2Q96I59 477 aaKnown RBP6.07□□□□□ -1.44
CNOT1-211ENST00000567188 BIRC8Q96P09 236 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 SHCBP1LQ9BZQ2 653 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 HIPK3Q9H422 1215 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 APEX2Q9UBZ4 518 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 TDRKHQ9Y2W6 561 aaKnown RBP6.07□□□□□ -1.44
CNOT1-211ENST00000567188 LRRC42Q9Y546 428 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 PEX16Q9Y5Y5 336 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 HUS1O60921 280 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 SNRPAP09012 282 aaKnown RBP6.07□□□□□ -1.44
CNOT1-211ENST00000567188 FASP25445 335 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 VAC14Q08AM6 782 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 ZNF792Q3KQV3 632 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 KLHL17Q6TDP4 642 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 ATG14Q6ZNE5 492 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 FRMD7Q6ZUT3 714 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 MTDHQ86UE4 582 aaKnown RBP6.07□□□□□ -1.44
CNOT1-211ENST00000567188 CCNJLQ8IV13 435 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 FAM9CQ8IZT9 166 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 PPTC7Q8NI37 304 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 ZNF333Q96JL9 665 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 MS4A4AQ96JQ5 239 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 ART5Q96L15 291 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 SLC4A5Q9BY07 1137 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 UBXN6Q9BZV1 441 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 C6orf62Q9GZU0 229 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-211ENST00000567188 SEMA6BQ9H3T3 888 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 SPATA2Q9UM82 520 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 RRN3P2A6NIE6 340 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 H7C2Y5 167 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 NKRFO15226 690 aaKnown RBP eCLIP6.07□□□□□ -1.44
CNOT1-211ENST00000567188 FGRP09769 529 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 GNA15P30679 374 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 CTNNB1P35222 781 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 MMRN1Q13201 1228 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 RASA2Q15283 850 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 MCOLN1Q9GZU1 580 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 GOLGA2P5Q9HBQ8 144 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 ABCG2Q9UNQ0 655 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 UBIAD1Q9Y5Z9 338 aa6.07□□□□□ -1.44
CNOT1-211ENST00000567188 PSMD10O75832 226 aa6.06□□□□□ -1.44
CNOT1-211ENST00000567188 CRYZL1O95825 349 aa6.06□□□□□ -1.44
CNOT1-211ENST00000567188 TGM6O95932 706 aa6.06□□□□□ -1.44
CNOT1-211ENST00000567188 TMEM253P0C7T8 217 aa6.06□□□□□ -1.44
CNOT1-211ENST00000567188 TSHRP16473 764 aa6.06□□□□□ -1.44
CNOT1-211ENST00000567188 NAT1P18440 290 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms