RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SCAND2PQ9GZW5 306 aaPredicted RBP15.89■□□□□ 0.13
PALB2-205ENST00000567003 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.89■□□□□ 0.13
PALB2-205ENST00000567003 SLC12A6Q9UHW9 1150 aa15.89■□□□□ 0.13
PALB2-205ENST00000567003 ZFR2Q9UPR6 939 aaKnown RBP15.89■□□□□ 0.13
PALB2-205ENST00000567003 SNX10Q9Y5X0 201 aa15.89■□□□□ 0.13
PALB2-205ENST00000567003 TRPM6Q9BX84 2022 aa15.89■□□□□ 0.13
PALB2-205ENST00000567003 NAV2Q8IVL1 2488 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.88■□□□□ 0.13
PALB2-205ENST00000567003 A0A1W2PNU3 283 aaPredicted RBP15.88■□□□□ 0.13
PALB2-205ENST00000567003 ALOX15BO15296 676 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 PMM2O15305 246 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 THAP12O43422 761 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 CNTN5O94779 1100 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 SRCP12931 536 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 RRM1P23921 792 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 TMPRSS3P57727 454 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 CDK17Q00537 523 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 ZNF177Q13360 481 aaPredicted RBP15.88■□□□□ 0.13
PALB2-205ENST00000567003 PDCLQ13371 301 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 KLHL10Q6JEL2 608 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 PTAR1Q7Z6K3 402 aaPredicted RBP15.88■□□□□ 0.13
PALB2-205ENST00000567003 TMEM110Q86TL2 294 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 CHST14Q8NCH0 376 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 KCNE4Q8WWG9 221 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 SMARCE1Q969G3 411 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 VCPIP1Q96JH7 1222 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 DEPDC7Q96QD5 511 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 PSMB7Q99436 277 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 TRIM62Q9BVG3 475 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 GTPBP4Q9BZE4 634 aaKnown RBP15.88■□□□□ 0.13
PALB2-205ENST00000567003 INTS2Q9H0H0 1204 aaKnown RBP15.88■□□□□ 0.13
PALB2-205ENST00000567003 MUC3BQ9H195 1237 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 THAP9Q9H5L6 903 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 HS3ST4Q9Y661 456 aa15.88■□□□□ 0.13
PALB2-205ENST00000567003 PMS2P1A4D2B8 440 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 CASC3O15234 703 aaKnown RBP15.87■□□□□ 0.13
PALB2-205ENST00000567003 KLK10O43240 276 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 SMAD6O43541 496 aaKnown RBP15.87■□□□□ 0.13
PALB2-205ENST00000567003 PCDH8O95206 1070 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 GNA15P30679 374 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 AKT2P31751 481 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 CCR1P32246 355 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 CHRNA3P32297 505 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 NME3Q13232 169 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 BROXQ5VW32 411 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 GJB7Q6PEY0 223 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 LINGO4Q6UY18 593 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 PASD1Q8IV76 773 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 OR2A12Q8NGT7 310 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 IFI44Q8TCB0 444 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 GRIN3AQ8TCU5 1115 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 STK32AQ8WU08 396 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 ZNF606Q8WXB4 792 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 CEP63Q96MT8 703 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 GSDMAQ96QA5 445 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 SLC2A13Q96QE2 648 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 MED15Q96RN5 788 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 TNKS2Q9H2K2 1166 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 ASCL3Q9NQ33 180 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 DNAJC28Q9NX36 388 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 CNTN6Q9UQ52 1028 aa15.87■□□□□ 0.13
PALB2-205ENST00000567003 RP1P56715 2156 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 K7ESM1 405 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 PSMA7O14818 248 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 PAGE1O75459 146 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 ENDOD1O94919 500 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 SMC2O95347 1197 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 HNRNPA2B1P22626 353 aaKnown RBP15.86■□□□□ 0.13
PALB2-205ENST00000567003 LSSP48449 732 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 OXCT1P55809 520 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 CETN1Q12798 172 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 FGL2Q14314 439 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 ALFQ53S48 1182 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 C3orf38Q5JPI3 329 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 CRTC1Q6UUV9 634 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 Q6ZSR6 202 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 FAM183BPQ6ZVS7 135 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 ATP11CQ8NB49 1132 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 SPATA20Q8TB22 786 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 MAPK15Q8TD08 544 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 CCDC34Q96HJ3 373 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 CPXM1Q96SM3 734 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 SIK2Q9H0K1 926 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 POLR1BQ9H9Y6 1135 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 UBE2TQ9NPD8 197 aaPredicted RBP15.86■□□□□ 0.13
PALB2-205ENST00000567003 ANLNQ9NQW6 1124 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 NLGN3Q9NZ94 848 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 VPS51Q9UID3 782 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 SATB2Q9UPW6 733 aa15.86■□□□□ 0.13
PALB2-205ENST00000567003 RAD51BO15315 384 aa15.85■□□□□ 0.13
PALB2-205ENST00000567003 P4HA2O15460 535 aa15.85■□□□□ 0.13
PALB2-205ENST00000567003 DXOO77932 396 aaKnown RBP15.85■□□□□ 0.13
PALB2-205ENST00000567003 RHOCP08134 193 aa15.85■□□□□ 0.13
PALB2-205ENST00000567003 ALPPL2P10696 532 aa15.85■□□□□ 0.13
PALB2-205ENST00000567003 SLC2A3P11169 496 aa15.85■□□□□ 0.13
PALB2-205ENST00000567003 TGM2P21980 687 aa15.85■□□□□ 0.13
PALB2-205ENST00000567003 RHDQ02161 417 aa15.85■□□□□ 0.13
PALB2-205ENST00000567003 APBA1Q02410 837 aa15.85■□□□□ 0.13
PALB2-205ENST00000567003 DRAP1Q14919 205 aaPredicted RBP15.85■□□□□ 0.13
PALB2-205ENST00000567003 CDKN3Q16667 212 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms