RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 C2orf49Q9BVC5 232 aaPredicted RBP18.77■□□□□ 0.6
USB1-213ENST00000566292 RAB6CQ9H0N0 254 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 NLRC4Q9NPP4 1024 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 FAM207AQ9NSI2 230 aaPredicted RBP18.77■□□□□ 0.6
USB1-213ENST00000566292 FANCLQ9NW38 375 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 TMEM51Q9NW97 253 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 SIK3Q9Y2K2 1263 aa18.77■□□□□ 0.6
USB1-213ENST00000566292 ANKRD11Q6UB99 2663 aaPredicted RBP18.77■□□□□ 0.6
USB1-213ENST00000566292 FREM2Q5SZK8 3169 aa18.77■□□□□ 0.59
USB1-213ENST00000566292 FAM208BQ5VWN6 2430 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 ARID1BQ8NFD5 2236 aaPredicted RBP18.76■□□□□ 0.59
USB1-213ENST00000566292 GOLGA8CPA6NN73 597 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 RNF103O00237 685 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 SRGAP2O75044 1071 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 ENDOD1O94919 500 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 OR1E1P30953 314 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 MAT2AP31153 395 aaKnown RBP18.76■□□□□ 0.59
USB1-213ENST00000566292 SOX5P35711 763 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 TAS2R38P59533 333 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 CDR2Q01850 454 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 ACBD5Q5T8D3 534 aaPredicted RBP18.76■□□□□ 0.59
USB1-213ENST00000566292 NAPEPLDQ6IQ20 393 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 LINGO4Q6UY18 593 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 PHLDB2Q86SQ0 1253 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 GATAD2AQ86YP4 633 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 DCAF4L2Q8NA75 395 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 OR2A12Q8NGT7 310 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 SKA1Q96BD8 255 aa18.76■□□□□ 0.59
USB1-213ENST00000566292 TAF4O00268 1085 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 TNFSF14O43557 240 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 MMP8P22894 467 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 ANP32AP39687 249 aaKnown RBP18.75■□□□□ 0.59
USB1-213ENST00000566292 NXPH1P58417 271 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 ATP11AP98196 1134 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 SCAPQ12770 1279 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 C6orf118Q5T5N4 469 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 PIP5KL1Q5T9C9 394 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 TMPRSS7Q7RTY8 843 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 PRPF39Q86UA1 669 aaKnown RBP18.75■□□□□ 0.59
USB1-213ENST00000566292 TRIM69Q86WT6 500 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 CHST14Q8NCH0 376 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 SLC30A5Q8TAD4 765 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 ARRDC3Q96B67 414 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 C11orf70Q9BRQ4 267 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 GDF3Q9NR23 364 aa18.75■□□□□ 0.59
USB1-213ENST00000566292 RALYQ9UKM9 306 aaKnown RBP18.75■□□□□ 0.59
USB1-213ENST00000566292 DSPP15924 2871 aaKnown RBP18.75■□□□□ 0.59
USB1-213ENST00000566292 ILVBLA1L0T0 632 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 TLR4O00206 839 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 ZMPSTE24O75844 475 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 GJB6O95452 261 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 CHRNA3P32297 505 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 CLCN6P51797 869 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 COPB1P53618 953 aaKnown RBP18.74■□□□□ 0.59
USB1-213ENST00000566292 C15orf59Q2T9L4 293 aaPredicted RBP18.74■□□□□ 0.59
USB1-213ENST00000566292 CCDC14Q49A88 953 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 FKBP15Q5T1M5 1219 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 C22orf39Q6P5X5 142 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 SPATS2Q86XZ4 545 aaKnown RBP18.74■□□□□ 0.59
USB1-213ENST00000566292 MARCH9Q86YJ5 346 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 MFSD2AQ8NA29 543 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 JOSD2Q8TAC2 188 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 SAP25Q8TEE9 199 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 RXFP2Q8WXD0 754 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 PCDHB18PQ96TA0 734 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 ZYG11BQ9C0D3 744 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 FARP1Q9Y4F1 1045 aaPredicted RBP18.74■□□□□ 0.59
USB1-213ENST00000566292 TRPM6Q9BX84 2022 aa18.74■□□□□ 0.59
USB1-213ENST00000566292 ZFYVE26Q68DK2 2539 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 ZNF821O75541 412 aaPredicted RBP18.73■□□□□ 0.59
USB1-213ENST00000566292 TPM2P07951 284 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 PTP4A2Q12974 167 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 SYCP1Q15431 976 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 CDO1Q16878 200 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 INAVAQ3KP66 663 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 SLC45A4Q5BKX6 768 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 TMIEQ8NEW7 156 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 CCDC114Q96M63 670 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 SPON2Q9BUD6 331 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 TNKS2Q9H2K2 1166 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 PREBQ9HCU5 417 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 PPARGC1AQ9UBK2 798 aaKnown RBP18.73■□□□□ 0.59
USB1-213ENST00000566292 FTSJ1Q9UET6 329 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 DMTF1Q9Y222 760 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 CA5BQ9Y2D0 317 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 DAAM1Q9Y4D1 1078 aa18.73■□□□□ 0.59
USB1-213ENST00000566292 TDRD6O60522 2096 aaKnown RBP18.73■□□□□ 0.59
USB1-213ENST00000566292 C2CD4BA6NLJ0 364 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 CBX4O00257 560 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 KPNA3O00505 521 aaPredicted RBP18.72■□□□□ 0.59
USB1-213ENST00000566292 UNGP13051 313 aaPredicted RBP18.72■□□□□ 0.59
USB1-213ENST00000566292 EPHA8P29322 1005 aaPredicted RBP18.72■□□□□ 0.59
USB1-213ENST00000566292 NUDT1P36639 197 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 STAT1P42224 750 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 ARF5P84085 180 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 NRG1Q02297 640 aaPredicted RBP18.72■□□□□ 0.59
USB1-213ENST00000566292 GNA12Q03113 381 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 BNIP3Q12983 259 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 MANEALQ5VSG8 457 aa18.72■□□□□ 0.59
USB1-213ENST00000566292 ZNF783Q6ZMS7 281 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms