RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 FFAR2O15552 330 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 RNGTTO60942 597 aaKnown RBP13.75□□□□□ -0.21
COMMD4-214ENST00000566230 TRUB2O95900 331 aaKnown RBP13.75□□□□□ -0.21
COMMD4-214ENST00000566230 APOEP02649 317 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 THEGLP0DJG4 465 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 CKMT1AP12532 417 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 PRLRP16471 622 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 SLC9A1P19634 815 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 CDK11BP21127 795 aaKnown RBP13.75□□□□□ -0.21
COMMD4-214ENST00000566230 PON1P27169 355 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 PCBP4P57723 403 aaKnown RBP13.75□□□□□ -0.21
COMMD4-214ENST00000566230 MYL5Q02045 173 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 RHDQ02161 417 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 KCNMA1Q12791 1236 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 DLG2Q15700 870 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 SETMARQ53H47 684 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-214ENST00000566230 TAF1BQ53T94 588 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-214ENST00000566230 ARHGAP40Q5TG30 622 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 CDKAL1Q5VV42 579 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 FAM46CQ5VWP2 391 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 TRIM65Q6PJ69 517 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 RRAGAQ7L523 313 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 TMC6Q7Z403 805 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 DSG4Q86SJ6 1040 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 ANKRD20A12PQ8NF67 263 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 KLK6Q92876 244 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 WBP1Q96G27 269 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 MYOCQ99972 504 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 INTS2Q9H0H0 1204 aaKnown RBP13.75□□□□□ -0.21
COMMD4-214ENST00000566230 ST7Q9NRC1 585 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 CNTN6Q9UQ52 1028 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 U3KQA8 63 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 CAPN8A6NHC0 703 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 F5H5T6 163 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 SART1O43290 800 aaKnown RBP13.74□□□□□ -0.21
COMMD4-214ENST00000566230 USP12O75317 370 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 PIAS2O75928 621 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 DXOO77932 396 aaKnown RBP13.74□□□□□ -0.21
COMMD4-214ENST00000566230 LSSP48449 732 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 IRAK1P51617 712 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 TMPRSS3P57727 454 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 GABREP78334 506 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 ACCSLQ4AC99 568 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 HSP90AA4PQ58FG1 418 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 MIIPQ5JXC2 388 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 PIP5KL1Q5T9C9 394 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 DENND1BQ6P3S1 775 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 C11orf57Q6ZUT1 292 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-214ENST00000566230 Q6ZVU0 165 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 ARHGEF19Q8IW93 802 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 ATP6V0D2Q8N8Y2 350 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 OR13H1Q8NG92 308 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 FEM1AQ9BSK4 669 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 CRACR2AQ9BSW2 395 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 SLC4A5Q9BY07 1137 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 PREBQ9HCU5 417 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 ASCL3Q9NQ33 180 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 APEX2Q9UBZ4 518 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 OR51B4Q9Y5P0 310 aa13.74□□□□□ -0.21
COMMD4-214ENST00000566230 A0A1W2PQU0 124 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 TCAF2A6NFQ2 919 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 C1QTNF3-AMACRE9PGA6 284 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 RNF103O00237 685 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 ALOX15BO15296 676 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 CSO75390 466 aaKnown RBP13.73□□□□□ -0.21
COMMD4-214ENST00000566230 CTSLP07711 333 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 CENPCQ03188 943 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 LY6DQ14210 128 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 TAF5Q15542 800 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 ZNF284Q2VY69 593 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 ANO6Q4KMQ2 910 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 BROXQ5VW32 411 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 FBXL22Q6P050 247 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 LSMEM2Q8N112 164 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 TTC9Q92623 222 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 APOLD1Q96LR9 279 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 NOX5Q96PH1 765 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 POLR1BQ9H9Y6 1135 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 POPDC2Q9HBU9 364 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 FZD3Q9NPG1 666 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.73□□□□□ -0.21
COMMD4-214ENST00000566230 SLC25A13Q9UJS0 675 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 SSUH2Q9Y2M2 353 aa13.73□□□□□ -0.21
COMMD4-214ENST00000566230 A0A1W2PNU3 283 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-214ENST00000566230 E5RJQ4 531 aa13.72□□□□□ -0.21
COMMD4-214ENST00000566230 PES1O00541 588 aaKnown RBP13.72□□□□□ -0.21
COMMD4-214ENST00000566230 KLK10O43240 276 aa13.72□□□□□ -0.21
COMMD4-214ENST00000566230 MT-CO1P00395 513 aa13.72□□□□□ -0.21
COMMD4-214ENST00000566230 ZNF18P17022 549 aa13.72□□□□□ -0.21
COMMD4-214ENST00000566230 ACADSBP45954 432 aa13.72□□□□□ -0.21
COMMD4-214ENST00000566230 ZNF165P49910 485 aa13.72□□□□□ -0.21
COMMD4-214ENST00000566230 UCNP55089 124 aa13.72□□□□□ -0.21
COMMD4-214ENST00000566230 CLDN2P57739 230 aa13.72□□□□□ -0.21
COMMD4-214ENST00000566230 ERVPABLB-1P60509 514 aa13.72□□□□□ -0.21
COMMD4-214ENST00000566230 YWHAZP63104 245 aaKnown RBP13.72□□□□□ -0.21
COMMD4-214ENST00000566230 NCAPHQ15003 741 aa13.72□□□□□ -0.21
COMMD4-214ENST00000566230 TMEM110Q86TL2 294 aa13.72□□□□□ -0.21
COMMD4-214ENST00000566230 SLC22A18ASQ8N1D0 253 aa13.72□□□□□ -0.21
COMMD4-214ENST00000566230 SH2D3CQ8N5H7 860 aa13.72□□□□□ -0.21
COMMD4-214ENST00000566230 STK32AQ8WU08 396 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms