RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 GAS8O95995 478 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 IFNB1P01574 187 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 JCHAINP01591 159 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 ITGAVP06756 1048 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 SRPRAP08240 638 aaKnown RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 DLDP09622 509 aaKnown RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 CCNB1P14635 433 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 RBL1P28749 1068 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 COILP38432 576 aaPredicted RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 KCNJ1P48048 391 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 NUMBP49757 651 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 CLCN6P51797 869 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 ARF5P84085 180 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 ZNF235Q14590 738 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 LBRQ14739 615 aaKnown RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 PRKD1Q15139 912 aaPredicted RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 PON2Q15165 354 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 OASLQ15646 514 aaKnown RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 FUT11Q495W5 492 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 ACCSLQ4AC99 568 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 FBXO43Q4G163 708 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 INO80DQ53TQ3 878 aaPredicted RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 SDE2Q6IQ49 451 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 CCDC70Q6NSX1 233 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 CCDC137Q6PK04 289 aaKnown RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 ARHGAP36Q6ZRI8 547 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 ZNF572Q7Z3I7 529 aaPredicted RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 TRMT11Q7Z4G4 463 aaKnown RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 MAATS1Q7Z4T9 603 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 ADIPOR2Q86V24 386 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 KLHL7Q8IXQ5 586 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 C12orf50Q8NA57 414 aaPredicted RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 ATP11CQ8NB49 1132 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 KCNV2Q8TDN2 545 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 FATE1Q969F0 183 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 UHRF1Q96T88 793 aaPredicted RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 NELL2Q99435 816 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 VAT1Q99536 393 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 CINPQ9BW66 212 aaPredicted RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 RBM22Q9NW64 420 aaKnown RBP eCLIP7.94□□□□□ -1.14
CDH1-208ENST00000565810 KLHL8Q9P2G9 620 aaPredicted RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 SEPT3Q9UH03 358 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 MUTYHQ9UIF7 546 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 TRHDEQ9UKU6 1024 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 INTS6Q9UL03 887 aaKnown RBP7.94□□□□□ -1.14
CDH1-208ENST00000565810 ERVW-1Q9UQF0 538 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 STARD13Q9Y3M8 1113 aa7.94□□□□□ -1.14
CDH1-208ENST00000565810 PRRT4C9JH25 899 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 KCNK1O00180 336 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 ZMPSTE24O75844 475 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 TMCC1O94876 653 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 ECEL1O95672 775 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 CES1P23141 567 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 GLDCP23378 1020 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 HSPA9P38646 679 aaKnown RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 MMP13P45452 471 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 RECQLP46063 649 aaPredicted RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 SERPINH1P50454 418 aaKnown RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 VASPP50552 380 aaPredicted RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 SNRPD1P62314 119 aaKnown RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 IFI35P80217 286 aaPredicted RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 MRPS21P82921 87 aaKnown RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 ITKQ08881 620 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 C2orf54Q08AI8 447 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 DHX34Q14147 1143 aaKnown RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 LRRC32Q14392 662 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 PPP1R7Q15435 360 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 FNDC3BQ53EP0 1204 aaKnown RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 TEX44Q53QW1 395 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 TMEM196Q5HYL7 178 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 DGKKQ5KSL6 1271 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 TMEM215Q68D42 235 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 NAIF1Q69YI7 327 aaPredicted RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 ITPRIPL1Q6GPH6 555 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 TXNDC11Q6PKC3 985 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 LINGO4Q6UY18 593 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 C4orf22Q6V702 233 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 LEKR1Q6ZMV7 388 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 SYDE1Q6ZW31 735 aaPredicted RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 B4GALNT4Q76KP1 1039 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 PID1Q7Z2X4 250 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 CHPFQ8IZ52 775 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 PHTF2Q8N3S3 785 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 SH2D3CQ8N5H7 860 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 ZNF513Q8N8E2 541 aaPredicted RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 FAM71DQ8N9W8 422 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 KDM1BQ8NB78 822 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 CCHCR1Q8TD31 782 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 USP33Q8TEY7 942 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 CYB5D2Q8WUJ1 264 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 LRRN4Q8WUT4 740 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 MAML1Q92585 1016 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 RPL10LQ96L21 214 aaKnown RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 KRT12Q99456 494 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 TMEM121Q9BTD3 319 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 CARD6Q9BX69 1037 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 CEP44Q9C0F1 390 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 DDX47Q9H0S4 455 aaKnown RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 C10orf88Q9H8K7 445 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 L2HGDHQ9H9P8 463 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms