RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 SHISA5Q8N114 240 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 ALLCQ8N6M5 410 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 TMEM102Q8N9M5 508 aaPredicted RBP6.43□□□□□ -1.38
UBFD1-204ENST00000565634 TXNDC5Q8NBS9 432 aaKnown RBP6.43□□□□□ -1.38
UBFD1-204ENST00000565634 PHC3Q8NDX5 983 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 ANKRD20A12PQ8NF67 263 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 SCAMP5Q8TAC9 235 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 SLC30A5Q8TAD4 765 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 SLC2A14Q8TDB8 520 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 USP33Q8TEY7 942 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 E2F7Q96AV8 911 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 ANAPC16Q96DE5 110 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 CYFIP2Q96F07 1278 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 PCED1BQ96HM7 432 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 ZNF560Q96MR9 790 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 ACBD6Q9BR61 282 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 ANP32EQ9BTT0 268 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 DKK4Q9UBT3 224 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 NOCTQ9UK39 431 aaKnown RBP6.43□□□□□ -1.38
UBFD1-204ENST00000565634 PCOLCE2Q9UKZ9 415 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 HIF3AQ9Y2N7 669 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 YIPF1Q9Y548 306 aa6.43□□□□□ -1.38
UBFD1-204ENST00000565634 UBR5O95071 2799 aaPredicted RBP6.43□□□□□ -1.38
UBFD1-204ENST00000565634 C2CD3Q4AC94 2353 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 CBX4O00257 560 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 O00370 1275 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 DDX3XO00571 662 aaKnown RBP eCLIP6.42□□□□□ -1.38
UBFD1-204ENST00000565634 TRAPPC3O43617 180 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 GJB6O95452 261 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 KLF8O95600 359 aaPredicted RBP6.42□□□□□ -1.38
UBFD1-204ENST00000565634 PF4P02776 101 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 FAM163BP0C2L3 166 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 CD19P15391 556 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 MAP4P27816 1152 aaKnown RBP6.42□□□□□ -1.38
UBFD1-204ENST00000565634 LHX1P48742 406 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 RGS7P49802 495 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 MAP3K7CLP57077 242 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 FMO1Q01740 532 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 CYP27A1Q02318 531 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 GPR17Q13304 367 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 TAF5Q15542 800 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 CNGA2Q16280 664 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 CRY1Q16526 586 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 ASTE1Q2TB18 679 aaPredicted RBP6.42□□□□□ -1.38
UBFD1-204ENST00000565634 KIAA1614Q5VZ46 1190 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 FDX2Q6P4F2 183 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 CCDC186Q7Z3E2 898 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 METTL23Q86XA0 190 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 RELL1Q8IUW5 271 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 TMEM139Q8IV31 216 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 THEM5Q8N1Q8 247 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 TMEM86AQ8N2M4 240 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 B3GALNT2Q8NCR0 500 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 MYCBPAPQ8TBZ2 947 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 CLEC4CQ8WTT0 213 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 CPA5Q8WXQ8 436 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 USP13Q92995 863 aaPredicted RBP6.42□□□□□ -1.38
UBFD1-204ENST00000565634 CD101Q93033 1021 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 MYLPFQ96A32 169 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 JAKMIP2Q96AA8 810 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 CYP2S1Q96SQ9 504 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 NT5C1AQ9BXI3 368 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 TMPRSS13Q9BYE2 586 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 SLC6A17Q9H1V8 727 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 HAUS4Q9H6D7 363 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 THG1LQ9NWX6 298 aaKnown RBP6.42□□□□□ -1.38
UBFD1-204ENST00000565634 AIPL1Q9NZN9 384 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 ARHGAP20Q9P2F6 1191 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 KLHL42Q9P2K6 505 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 ANKMY1Q9P2S6 941 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 ADGRE2Q9UHX3 823 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 CDH9Q9ULB4 789 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 R3HCC1Q9Y3T6 440 aaKnown RBP6.42□□□□□ -1.38
UBFD1-204ENST00000565634 RNF114Q9Y508 228 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 WNT6Q9Y6F9 365 aa6.42□□□□□ -1.38
UBFD1-204ENST00000565634 ZFC3H1O60293 1989 aaKnown RBP6.42□□□□□ -1.38
UBFD1-204ENST00000565634 ITPR3Q14573 2671 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 hCG_2014768A0A024R1R8 64 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 TEX51A0A1B0GUA7 166 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 A0A1W2PQJ5 194 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 TMCO5BA8MYB1 307 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 F8VP50 259 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 H7C4K7 107 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 THAP12O43422 761 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 CBFA2T2O43439 604 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 F13BP05160 661 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 TPM2P07951 284 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 SYPP08247 313 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 HAPLN1P10915 354 aaPredicted RBP6.41□□□□□ -1.38
UBFD1-204ENST00000565634 VDRP11473 427 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 C6P13671 934 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 CYP11B1P15538 503 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 HMGA1P17096 107 aaKnown RBP6.41□□□□□ -1.38
UBFD1-204ENST00000565634 ATF6P18850 670 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 TRIM21P19474 475 aaKnown RBP6.41□□□□□ -1.38
UBFD1-204ENST00000565634 TBXAS1P24557 533 aaPredicted RBP6.41□□□□□ -1.38
UBFD1-204ENST00000565634 STAT1P42224 750 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 GPD2P43304 727 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 LIG3P49916 1009 aa6.41□□□□□ -1.38
UBFD1-204ENST00000565634 CSRP3P50461 194 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms