RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 SDC4P31431 198 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 PTPN9P43378 593 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 GSCP56915 257 aaPredicted RBP20.35■□□□□ 0.85
CLN6-206ENST00000565471 ATP11AP98196 1134 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 NRG1Q02297 640 aaPredicted RBP20.35■□□□□ 0.85
CLN6-206ENST00000565471 INAVAQ3KP66 663 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 NAPEPLDQ6IQ20 393 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 PRPF39Q86UA1 669 aaKnown RBP20.35■□□□□ 0.85
CLN6-206ENST00000565471 SLCO6A1Q86UG4 719 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 TRIM69Q86WT6 500 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 NEK11Q8NG66 645 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 OR2A12Q8NGT7 310 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 RXFP2Q8WXD0 754 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 ERGIC2Q96RQ1 377 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 ELF4Q99607 663 aaPredicted RBP20.35■□□□□ 0.85
CLN6-206ENST00000565471 C11orf70Q9BRQ4 267 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 ZMIZ1Q9ULJ6 1067 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 DMTF1Q9Y222 760 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 BTBD3Q9Y2F9 522 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 C2CD4BA6NLJ0 364 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 K7ERQ8 282 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 BNIP3LO60238 219 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 DKK1O94907 266 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 MBD3O95983 291 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 CHRNA3P32297 505 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 PTP4A2Q12974 167 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 ARL13BQ3SXY8 428 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 CCDC14Q49A88 953 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 RETSATQ6NUM9 610 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 STRADAQ7RTN6 431 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 PNPLA1Q8N8W4 532 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 TMIEQ8NEW7 156 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 SLC30A5Q8TAD4 765 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 PCMTD1Q96MG8 357 aaPredicted RBP20.34■□□□□ 0.85
CLN6-206ENST00000565471 PCDHB18PQ96TA0 734 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 RETREG1Q9H6L5 497 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 PREBQ9HCU5 417 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 GDF3Q9NR23 364 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 TOR4AQ9NXH8 423 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 ARHGAP20Q9P2F6 1191 aa20.34■□□□□ 0.85
CLN6-206ENST00000565471 FRYQ5TBA9 3013 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 CXorf51AA0A1B0GTR3 108 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 WNT9AO14904 365 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 YKT6O15498 198 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 SMAD6O43541 496 aaKnown RBP20.33■□□□□ 0.85
CLN6-206ENST00000565471 PRNPP04156 253 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 CTSLP07711 333 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 RRM1P23921 792 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 ADRA1BP35368 520 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 NSFP46459 744 aaKnown RBP20.33■□□□□ 0.85
CLN6-206ENST00000565471 UBXN1Q04323 297 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 SLC20A2Q08357 652 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 CCDC15Q0P6D6 951 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 NCAPHQ15003 741 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 C15orf59Q2T9L4 293 aaPredicted RBP20.33■□□□□ 0.85
CLN6-206ENST00000565471 CCDC183Q5T5S1 534 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 MANEALQ5VSG8 457 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 C22orf39Q6P5X5 142 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 APTXQ7Z2E3 356 aaKnown RBP20.33■□□□□ 0.85
CLN6-206ENST00000565471 PHF13Q86YI8 300 aaPredicted RBP20.33■□□□□ 0.85
CLN6-206ENST00000565471 MFSD2AQ8NA29 543 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 OR7D4Q8NG98 312 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 JOSD2Q8TAC2 188 aa20.33■□□□□ 0.85
CLN6-206ENST00000565471 TLR4O00206 839 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 CBX4O00257 560 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 TNFSF14O43557 240 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 ZMPSTE24O75844 475 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 CALB1P05937 261 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 ATXN1LP0C7T5 689 aaKnown RBP20.32■□□□□ 0.84
CLN6-206ENST00000565471 CDK11BP21127 795 aaKnown RBP20.32■□□□□ 0.84
CLN6-206ENST00000565471 NXPH1P58417 271 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 TAS2R38P59533 333 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 GNA12Q03113 381 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 OVGP1Q12889 678 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 CDO1Q16878 200 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 CLEC16AQ2KHT3 1053 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 POM121L1PQ3SYA9 428 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 SETMARQ53H47 684 aaPredicted RBP20.32■□□□□ 0.84
CLN6-206ENST00000565471 RAB6CQ53S08 254 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 PIP5KL1Q5T9C9 394 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 LINGO4Q6UY18 593 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 IQCHQ86VS3 1027 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 ZCCHC14Q8WYQ9 949 aaKnown RBP20.32■□□□□ 0.84
CLN6-206ENST00000565471 CENPIQ92674 756 aaPredicted RBP20.32■□□□□ 0.84
CLN6-206ENST00000565471 SPON2Q9BUD6 331 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 CEP44Q9C0F1 390 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 RAB6CQ9H0N0 254 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 OSBPL2Q9H1P3 480 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 HSD3B7Q9H2F3 369 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 ERVMER34-1Q9H9K5 563 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 ATP13A1Q9HD20 1204 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 ADAM22Q9P0K1 906 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 OR12D3Q9UGF7 316 aa20.32■□□□□ 0.84
CLN6-206ENST00000565471 KPNA3O00505 521 aaPredicted RBP20.31■□□□□ 0.84
CLN6-206ENST00000565471 MAGEC1O60732 1142 aa20.31■□□□□ 0.84
CLN6-206ENST00000565471 KRT3P12035 628 aa20.31■□□□□ 0.84
CLN6-206ENST00000565471 GLDCP23378 1020 aa20.31■□□□□ 0.84
CLN6-206ENST00000565471 ETFBP38117 255 aa20.31■□□□□ 0.84
CLN6-206ENST00000565471 RECQLP46063 649 aaPredicted RBP20.31■□□□□ 0.84
CLN6-206ENST00000565471 MAPKAPK2P49137 400 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms