RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 RAB23Q9ULC3 237 aa16.75■□□□□ 0.27
THUMPD1-203ENST00000565248 MRPS17Q9Y2R5 130 aaKnown RBP16.75■□□□□ 0.27
THUMPD1-203ENST00000565248 CCDC151A5D8V7 595 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 NRG2O14511 850 aaPredicted RBP16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 GREM1O60565 184 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 TSPAN3O60637 253 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 ITIH2P19823 946 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 VPS41P49754 854 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 VSNL1P62760 191 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 CAV1Q03135 178 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 PPIDQ08752 370 aaKnown RBP16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 GPS1Q13098 491 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 USP4Q13107 963 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 ST3GAL2Q16842 350 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 ANO4Q32M45 955 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 P3H1Q32P28 736 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 AFMIDQ63HM1 303 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 PCGF5Q86SE9 256 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 SETD3Q86TU7 594 aaPredicted RBP16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 ZNF354CQ86Y25 554 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 BBS7Q8IWZ6 715 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 NPAS3Q8IXF0 933 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 CCDC13Q8IYE1 715 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 CFAP52Q8N1V2 620 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 NSMCE1Q8WV22 266 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 CASKIN2Q8WXE0 1202 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 PRICKLE1Q96MT3 831 aaPredicted RBP16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 TSGA13Q96PP4 275 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 VAT1Q99536 393 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 LGMNQ99538 433 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 KLC2Q9H0B6 622 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 MAGEH1Q9H213 219 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 USP29Q9HBJ7 922 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 LTB4R2Q9NPC1 389 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 WHRNQ9P202 907 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 SNX24Q9Y343 169 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 NEU2Q9Y3R4 380 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 MTF2Q9Y483 593 aaPredicted RBP16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 SPTBN2O15020 2390 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 GPR179Q6PRD1 2367 aa16.74■□□□□ 0.27
THUMPD1-203ENST00000565248 ESYT3A0FGR9 886 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 DCDC2BA2VCK2 349 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 C5orf60A6NFR6 353 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 ZSCAN5CA6NGD5 496 aaPredicted RBP16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 RASA4BC9J798 803 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 TRDMT1O14717 391 aaKnown RBP16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 RASA4O43374 803 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 TBL1XO60907 577 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 LILRB5O75023 590 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 NEBLO76041 1014 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 PRAMEF12O95522 483 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 RHOCP08134 193 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 CCNCP24863 283 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 RPS9P46781 194 aaKnown RBP16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 IRAK1P51617 712 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 OXCT1P55809 520 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 RPS24P62847 133 aaKnown RBP16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 ZXDBP98169 803 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 POLD3Q15054 466 aaPredicted RBP16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 ZNF77Q15935 545 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 MPP7Q5T2T1 576 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 ARTNQ5T4W7 220 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 CCNI2Q6ZMN8 369 aaPredicted RBP16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 ARHGEF18Q6ZSZ5 1173 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 CIR1Q86X95 450 aaPredicted RBP16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 ARHGAP12Q8IWW6 846 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 CCDC33Q8N5R6 958 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 ZNF557Q8N988 423 aaPredicted RBP16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 DDI1Q8WTU0 396 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 SMARCD2Q92925 531 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 P2RY11Q96G91 374 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 ZSWIM3Q96MP5 696 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 SLC39A8Q9C0K1 460 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 C10orf88Q9H8K7 445 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 SEPT10Q9P0V9 454 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 MTRF1LQ9UGC7 380 aaKnown RBP16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 CCL26Q9Y258 94 aa16.73■□□□□ 0.27
THUMPD1-203ENST00000565248 DOCK6Q96HP0 2047 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 A0A0A0MRY4 1105 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 ILVBLA1L0T0 632 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 BHMG1C9JSJ3 638 aaPredicted RBP16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 H0Y626 953 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 SMAPO00193 183 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 RNF103O00237 685 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 SCAMP3O14828 347 aaKnown RBP16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 OPHN1O60890 802 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 GCATO75600 419 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 CD72P21854 359 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 RPL21P46778 160 aaKnown RBP16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 PAPOLAP51003 745 aaKnown RBP16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 NRLP54845 237 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 GDF10P55107 478 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 CDH18Q13634 790 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 ZNF852Q6ZMS4 543 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 ZNF783Q6ZMS7 281 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 E2F7Q96AV8 911 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 CLDN23Q96B33 292 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 SPATA13Q96N96 652 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 KXD1Q9BQD3 176 aa16.72■□□□□ 0.27
THUMPD1-203ENST00000565248 SP110Q9HB58 689 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms