RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 BCAT2O15382 392 aaPredicted RBP31.44■■■□□ 2.62
CMTM4-204ENST00000563952 CREB3O43889 395 aa31.44■■■□□ 2.62
CMTM4-204ENST00000563952 GOT1P17174 413 aa31.44■■■□□ 2.62
CMTM4-204ENST00000563952 L1CAMP32004 1257 aa31.44■■■□□ 2.62
CMTM4-204ENST00000563952 ACVRL1P37023 503 aa31.44■■■□□ 2.62
CMTM4-204ENST00000563952 METAP1P53582 386 aa31.44■■■□□ 2.62
CMTM4-204ENST00000563952 GALCP54803 685 aa31.44■■■□□ 2.62
CMTM4-204ENST00000563952 POM121L1PQ3SYA9 428 aa31.44■■■□□ 2.62
CMTM4-204ENST00000563952 BIRC7Q96CA5 298 aa31.44■■■□□ 2.62
CMTM4-204ENST00000563952 TRIM7Q9C029 511 aa31.44■■■□□ 2.62
CMTM4-204ENST00000563952 RETREG1Q9H6L5 497 aa31.44■■■□□ 2.62
CMTM4-204ENST00000563952 SARDHQ9UL12 918 aa31.44■■■□□ 2.62
CMTM4-204ENST00000563952 SCINQ9Y6U3 715 aa31.44■■■□□ 2.62
CMTM4-204ENST00000563952 TMEM191CA6NGB0 347 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 PLK4O00444 970 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 MCF2LO15068 1137 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 SYPP08247 313 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 MYBL1P10243 752 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 EPHB2P29323 1055 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 CASP14P31944 242 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 ETFBP38117 255 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 CLCN6P51797 869 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 AIF1P55008 147 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 NFKBIBQ15653 356 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 FAM46CQ5VWP2 391 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 KIAA0895LQ68EN5 471 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 NCEH1Q6PIU2 408 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 OR2I1PQ8NGU4 316 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 CCDC114Q96M63 670 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 ISCUQ9H1K1 167 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 TNKS2Q9H2K2 1166 aa31.43■■■□□ 2.62
CMTM4-204ENST00000563952 FARP1Q9Y4F1 1045 aaPredicted RBP31.43■■■□□ 2.62
CMTM4-204ENST00000563952 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP31.43■■■□□ 2.62
CMTM4-204ENST00000563952 LRRC72A6NJI9 287 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 C1QTNF3-AMACRE9PGA6 284 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 ALOX15BO15296 676 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 CBFA2T2O43439 604 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 ZMPSTE24O75844 475 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 ZNF252P-AS1Q0IIN9 211 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 C22orf39Q6P5X5 142 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP31.42■■■□□ 2.62
CMTM4-204ENST00000563952 OR14C36Q8NHC7 312 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 PIP4K2CQ8TBX8 421 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 EPAS1Q99814 870 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 GPATCH2LQ9NWQ4 482 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 PPM1HQ9ULR3 514 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 SLCO1B1Q9Y6L6 691 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 CACNA1AO00555 2505 aa31.42■■■□□ 2.62
CMTM4-204ENST00000563952 RAMP2O60895 175 aa31.41■■■□□ 2.62
CMTM4-204ENST00000563952 DRD3P35462 400 aa31.41■■■□□ 2.62
CMTM4-204ENST00000563952 SERPINH1P50454 418 aaKnown RBP31.41■■■□□ 2.62
CMTM4-204ENST00000563952 ARF5P84085 180 aa31.41■■■□□ 2.62
CMTM4-204ENST00000563952 MINDY1Q8N5J2 469 aa31.41■■■□□ 2.62
CMTM4-204ENST00000563952 OR2A12Q8NGT7 310 aa31.41■■■□□ 2.62
CMTM4-204ENST00000563952 OR2T34Q8NGX1 318 aa31.41■■■□□ 2.62
CMTM4-204ENST00000563952 ARHGEF2Q92974 986 aaKnown RBP31.41■■■□□ 2.62
CMTM4-204ENST00000563952 ACE2Q9BYF1 805 aaPredicted RBP31.41■■■□□ 2.62
CMTM4-204ENST00000563952 MRPL47Q9HD33 250 aaKnown RBP31.41■■■□□ 2.62
CMTM4-204ENST00000563952 PCSK1NQ9UHG2 260 aa31.41■■■□□ 2.62
CMTM4-204ENST00000563952 RNF8O76064 485 aa31.4■■■□□ 2.62
CMTM4-204ENST00000563952 RECQLP46063 649 aaPredicted RBP31.4■■■□□ 2.62
CMTM4-204ENST00000563952 ADPRHP54922 357 aa31.4■■■□□ 2.62
CMTM4-204ENST00000563952 GRIK2Q13002 908 aa31.4■■■□□ 2.62
CMTM4-204ENST00000563952 RTL3Q8N8U3 475 aaKnown RBP31.4■■■□□ 2.62
CMTM4-204ENST00000563952 C1orf216Q8TAB5 229 aa31.4■■■□□ 2.62
CMTM4-204ENST00000563952 MAGEH1Q9H213 219 aa31.4■■■□□ 2.62
CMTM4-204ENST00000563952 AP4E1Q9UPM8 1137 aa31.4■■■□□ 2.62
CMTM4-204ENST00000563952 ACTL7AQ9Y615 435 aa31.4■■■□□ 2.62
CMTM4-204ENST00000563952 IGHV4-34P06331 123 aa31.39■■■□□ 2.62
CMTM4-204ENST00000563952 CTSLP07711 333 aa31.39■■■□□ 2.62
CMTM4-204ENST00000563952 CD27P26842 260 aa31.39■■■□□ 2.62
CMTM4-204ENST00000563952 CHRNA3P32297 505 aa31.39■■■□□ 2.62
CMTM4-204ENST00000563952 DNA2P51530 1060 aa31.39■■■□□ 2.62
CMTM4-204ENST00000563952 SLC20A2Q08357 652 aa31.39■■■□□ 2.62
CMTM4-204ENST00000563952 POLD3Q15054 466 aaPredicted RBP31.39■■■□□ 2.62
CMTM4-204ENST00000563952 ZNF354CQ86Y25 554 aa31.39■■■□□ 2.62
CMTM4-204ENST00000563952 ARFGAP1Q8N6T3 406 aa31.39■■■□□ 2.62
CMTM4-204ENST00000563952 CHST14Q8NCH0 376 aa31.39■■■□□ 2.62
CMTM4-204ENST00000563952 FNIP1Q8TF40 1166 aa31.39■■■□□ 2.62
CMTM4-204ENST00000563952 HPCAL4Q9UM19 191 aa31.39■■■□□ 2.62
CMTM4-204ENST00000563952 FCF1Q9Y324 198 aaKnown RBP31.39■■■□□ 2.62
CMTM4-204ENST00000563952 CHD5Q8TDI0 1954 aa31.38■■■□□ 2.61
CMTM4-204ENST00000563952 A0A087X0T9 212 aa31.38■■■□□ 2.61
CMTM4-204ENST00000563952 FAM228BP0C875 321 aa31.38■■■□□ 2.61
CMTM4-204ENST00000563952 CNTN1Q12860 1018 aa31.38■■■□□ 2.61
CMTM4-204ENST00000563952 SEMA3BQ13214 749 aa31.38■■■□□ 2.61
CMTM4-204ENST00000563952 PEBP4Q96S96 227 aa31.38■■■□□ 2.61
CMTM4-204ENST00000563952 CEP44Q9C0F1 390 aa31.38■■■□□ 2.61
CMTM4-204ENST00000563952 DHX35Q9H5Z1 703 aaKnown RBP31.38■■■□□ 2.61
CMTM4-204ENST00000563952 CATSPERBQ9H7T0 1116 aa31.38■■■□□ 2.61
CMTM4-204ENST00000563952 TM9SF3Q9HD45 589 aa31.38■■■□□ 2.61
CMTM4-204ENST00000563952 OPHN1O60890 802 aa31.37■■■□□ 2.61
CMTM4-204ENST00000563952 CSNK1EP49674 416 aaKnown RBP31.37■■■□□ 2.61
CMTM4-204ENST00000563952 AFF3P51826 1226 aaKnown RBP31.37■■■□□ 2.61
CMTM4-204ENST00000563952 TPI1P60174 286 aa31.37■■■□□ 2.61
CMTM4-204ENST00000563952 SPECC1LQ69YQ0 1117 aa31.37■■■□□ 2.61
CMTM4-204ENST00000563952 LEKR1Q6ZMV7 388 aa31.37■■■□□ 2.61
CMTM4-204ENST00000563952 GRIN3AQ8TCU5 1115 aa31.37■■■□□ 2.61
CMTM4-204ENST00000563952 THAP2Q9H0W7 228 aa31.37■■■□□ 2.61
CMTM4-204ENST00000563952 ARHGAP20Q9P2F6 1191 aa31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms