RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ATXN7L1Q9ULK2 861 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-204ENST00000563739 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-204ENST00000563739 K7ERQ8 282 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 NTN3O00634 580 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-204ENST00000563739 ALOX15BO15296 676 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 SMAD6O43541 496 aaKnown RBP10.64□□□□□ -0.71
SF3B3-204ENST00000563739 MAGEC1O60732 1142 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 CSF2P04141 144 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 SRCP12931 536 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 PFKFB1P16118 471 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 TRIM21P19474 475 aaKnown RBP10.64□□□□□ -0.71
SF3B3-204ENST00000563739 HNRNPA2B1P22626 353 aaKnown RBP10.64□□□□□ -0.71
SF3B3-204ENST00000563739 PSMC2P35998 433 aaKnown RBP10.64□□□□□ -0.71
SF3B3-204ENST00000563739 DPYDQ12882 1025 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 ZNF177Q13360 481 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-204ENST00000563739 PKP1Q13835 747 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 DLG2Q15700 870 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 KYAT3Q6YP21 454 aaKnown RBP10.64□□□□□ -0.71
SF3B3-204ENST00000563739 CCDC81Q6ZN84 652 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 NYAP1Q6ZVC0 841 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 HSCBQ8IWL3 235 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 RBFAQ8N0V3 343 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 GUF1Q8N442 669 aaKnown RBP10.64□□□□□ -0.71
SF3B3-204ENST00000563739 OR2A12Q8NGT7 310 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 LMO3Q8TAP4 145 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 OR8D1Q8WZ84 308 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 EXTL1Q92935 676 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 IFT43Q96FT9 208 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 SERPINB11Q96P15 392 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 FUCA2Q9BTY2 467 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 BOCQ9BWV1 1114 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 MIS12Q9H081 205 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 USP29Q9HBJ7 922 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 ANLNQ9NQW6 1124 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 ANKMY1Q9P2S6 941 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 HESX1Q9UBX0 185 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 ACSL6Q9UKU0 697 aa10.64□□□□□ -0.71
SF3B3-204ENST00000563739 SPTY2D1-AS1A0A0U1RR47 76 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 KCNU1A8MYU2 1149 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 M0QYV0 167 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 SNAP91O60641 907 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 GCATO75600 419 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 CELA2BP08218 269 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-204ENST00000563739 FAM87AP0C7U9 286 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 KRT13P13646 458 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 ANP32AP39687 249 aaKnown RBP10.63□□□□□ -0.71
SF3B3-204ENST00000563739 GPD2P43304 727 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 DUSP3P51452 185 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-204ENST00000563739 PMS1P54277 932 aaKnown RBP10.63□□□□□ -0.71
SF3B3-204ENST00000563739 ADAM9Q13443 819 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 SLC12A1Q13621 1099 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 TAF5Q15542 800 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 DEFB133Q30KQ1 61 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 ZSCAN23Q3MJ62 389 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 FOXD4L6Q3SYB3 417 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-204ENST00000563739 FOXD4L5Q5VV16 416 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-204ENST00000563739 ZCCHC8Q6NZY4 707 aaKnown RBP10.63□□□□□ -0.71
SF3B3-204ENST00000563739 FBXL22Q6P050 247 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 FOXD4L3Q6VB84 417 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-204ENST00000563739 Q6ZSR6 202 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 BEND5Q7L4P6 421 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 C14orf80Q86SX3 495 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 SMYD4Q8IYR2 804 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-204ENST00000563739 ZNF683Q8IZ20 524 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 FOXD4L4Q8WXT5 416 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-204ENST00000563739 ERCC4Q92889 916 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-204ENST00000563739 SLC35C1Q96A29 364 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 HSFY1Q96LI6 401 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 CCNL2Q96S94 520 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-204ENST00000563739 FEM1AQ9BSK4 669 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 HS3ST2Q9Y278 367 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 WASF2Q9Y6W5 498 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 NOTCH2Q04721 2471 aa10.63□□□□□ -0.71
SF3B3-204ENST00000563739 ANKRD36A6QL64 1941 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 FAM237AA0A1B0GTK4 181 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 A0A1B0GVL5 298 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 TCAF2A6NFQ2 919 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 CNTN5O94779 1100 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 TNFSF15O95150 251 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 ITGA2BP08514 1039 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 PAEPP09466 180 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 HGFP14210 728 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 SLC8A3P57103 927 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 LRMPQ12912 555 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 CLCA4Q14CN2 919 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 CNGA2Q16280 664 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 EDRF1Q3B7T1 1238 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 C5orf22Q49AR2 442 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 C6orf132Q5T0Z8 1188 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 RNF219Q5W0B1 726 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-204ENST00000563739 KCTD16Q68DU8 428 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 DENND1BQ6P3S1 775 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 RBM44Q6ZP01 1051 aaKnown RBP10.62□□□□□ -0.71
SF3B3-204ENST00000563739 PTAR1Q7Z6K3 402 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-204ENST00000563739 ARHGEF19Q8IW93 802 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 LIN37Q96GY3 246 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-204ENST00000563739 BTN2A3PQ96KV6 586 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 ZNF396Q96N95 335 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-204ENST00000563739 CLPBQ9H078 707 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 DNAJC28Q9NX36 388 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms