RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 TCHHL1Q5QJ38 904 aaPredicted RBP11.4□□□□□ -0.58
RPAP1-204ENST00000562303 REXO5Q96IC2 774 aaKnown RBP11.4□□□□□ -0.58
RPAP1-204ENST00000562303 FANCEQ9HB96 536 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 TPRKBQ9Y3C4 175 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 PNPLA6Q8IY17 1366 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 ADGRB3O60242 1522 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 URADA6NGE7 173 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 CROCC2H7BZ55 1655 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 SLITRK3O94933 977 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 ECDO95905 644 aaPredicted RBP11.4□□□□□ -0.58
RPAP1-204ENST00000562303 CLPTM1O96005 669 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 ADH1AP07327 375 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 HOXB8P17481 243 aaPredicted RBP11.4□□□□□ -0.58
RPAP1-204ENST00000562303 PTPN4P29074 926 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 MIPP30301 263 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 CD86P42081 329 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 HNMTP50135 292 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 NEK3P51956 506 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 ZC3H12AQ5D1E8 599 aaKnown RBP11.4□□□□□ -0.58
RPAP1-204ENST00000562303 FIGNQ5HY92 759 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 FAM205AQ6ZU69 1335 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 NIPA1Q7RTP0 329 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 ATL1Q8WXF7 558 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 HTATIP2Q9BUP3 242 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 RACGAP1Q9H0H5 632 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 ELL3Q9HB65 397 aaPredicted RBP11.4□□□□□ -0.58
RPAP1-204ENST00000562303 RHBDL2Q9NX52 303 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 CCDC167Q9P0B6 97 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 SNX6Q9UNH7 406 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 SH3GLB1Q9Y371 365 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 KIF1CO43896 1103 aaKnown RBP11.4□□□□□ -0.58
RPAP1-204ENST00000562303 MGRN1O60291 552 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 STX11O75558 287 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 KCNH1O95259 989 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 PRLRP16471 622 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 ABL2P42684 1182 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 GSTM5P46439 218 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 MRPS6P82932 125 aaKnown RBP11.4□□□□□ -0.58
RPAP1-204ENST00000562303 GPAT3Q53EU6 434 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 PMF1Q6P1K2 205 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 CYB5D1Q6P9G0 228 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 SMYD1Q8NB12 490 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 NKX2-3Q8TAU0 364 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 APOPT1Q96IL0 206 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 VCPIP1Q96JH7 1222 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 ATP13A3Q9H7F0 1226 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 CYLDQ9NQC7 956 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 THAP1Q9NVV9 213 aa11.4□□□□□ -0.58
RPAP1-204ENST00000562303 ISM1B1AKI9 464 aa11.4□□□□□ -0.59
RPAP1-204ENST00000562303 SNPHO15079 494 aa11.4□□□□□ -0.59
RPAP1-204ENST00000562303 CD3EAPO15446 510 aaKnown RBP11.4□□□□□ -0.59
RPAP1-204ENST00000562303 PRMT3O60678 531 aa11.4□□□□□ -0.59
RPAP1-204ENST00000562303 HNF4AP41235 474 aa11.4□□□□□ -0.59
RPAP1-204ENST00000562303 GCNT1Q02742 428 aa11.4□□□□□ -0.59
RPAP1-204ENST00000562303 LPIN1Q14693 890 aa11.4□□□□□ -0.59
RPAP1-204ENST00000562303 NDUFAF6Q330K2 333 aa11.4□□□□□ -0.59
RPAP1-204ENST00000562303 PRAMEF19Q5SWL8 479 aa11.4□□□□□ -0.59
RPAP1-204ENST00000562303 PARGQ86W56 976 aa11.4□□□□□ -0.59
RPAP1-204ENST00000562303 RTL3Q8N8U3 475 aaKnown RBP11.4□□□□□ -0.59
RPAP1-204ENST00000562303 HELQQ8TDG4 1101 aa11.4□□□□□ -0.59
RPAP1-204ENST00000562303 TINF2Q9BSI4 451 aa11.4□□□□□ -0.59
RPAP1-204ENST00000562303 OR12D3Q9UGF7 316 aa11.4□□□□□ -0.59
RPAP1-204ENST00000562303 NEXMIFQ5QGS0 1516 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 NRCAMQ92823 1304 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 TMEM191CA6NGB0 347 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 GTPBP1O00178 669 aaKnown RBP11.39□□□□□ -0.59
RPAP1-204ENST00000562303 PGK1P00558 417 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 RPL4P36578 427 aaKnown RBP11.39□□□□□ -0.59
RPAP1-204ENST00000562303 INHBEP58166 350 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 RGS1Q08116 209 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 CCNIQ14094 377 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 NOMO2Q5JPE7 1267 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 CYP2R1Q6VVX0 501 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 RBM23Q86U06 439 aaKnown RBP11.39□□□□□ -0.59
RPAP1-204ENST00000562303 FAM124AQ86V42 546 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 CHPFQ8IZ52 775 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 ADGRG2Q8IZP9 1017 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 OR10G6Q8NH81 332 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 MYCBPAPQ8TBZ2 947 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 WNT8BQ93098 351 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 MIEF2Q96C03 454 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 FERD3LQ96RJ6 166 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 MYOCQ99972 504 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 TM6SF2Q9BZW4 377 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 REEP1Q9H902 201 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 BPIFA1Q9NP55 256 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 FAM86B1E9PN63 330 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 CLOCKO15516 846 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 FAM86B2P0C5J1 330 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 FAM58BPP0C7Q3 252 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 MAPK8P45983 427 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 SP3Q02447 781 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 FAM46CQ5VWP2 391 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 TCP10LQ8TDR4 215 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 PPP1R13LQ8WUF5 828 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 RORBQ92753 470 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 KPNA5O15131 536 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 TLL1O43897 1013 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 NTRK1P04629 796 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 SSTR1P30872 391 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms