RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 AKAP5P24588 427 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 PEX2P28328 305 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 SERPINB6P35237 376 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 AARSP49588 968 aaKnown RBP eCLIP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 ADCY7P51828 1080 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 GPX6P59796 221 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 RPS26P62854 115 aaKnown RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 SULT2A1Q06520 285 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 RCN2Q14257 317 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 LPIN1Q14693 890 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 USP10Q14694 798 aaKnown RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 CYP2A13Q16696 494 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 HSF5Q4G112 596 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 RASIP1Q5U651 963 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 E4F1Q66K89 784 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 KLHDC10Q6PID8 442 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 DYMQ7RTS9 669 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 UBE3BQ7Z3V4 1068 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 TLK2Q86UE8 772 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 ZNF589Q86UQ0 364 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 ZNF227Q86WZ6 799 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 CCNJLQ8IV13 435 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 CDKL3Q8IVW4 592 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 FSIP1Q8NA03 581 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 NSUN7Q8NE18 718 aaKnown RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 DNAJB8Q8NHS0 232 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 PPP1R35Q8TAP8 253 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 DDX54Q8TDD1 881 aaKnown RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 SCFD1Q8WVM8 642 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 MRPS27Q92552 414 aaKnown RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 EXT2Q93063 718 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 ZKSCAN4Q969J2 545 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 PTERQ96BW5 349 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 GRAMD1AQ96CP6 724 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 CYFIP2Q96F07 1278 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 METTL2AQ96IZ6 378 aaKnown RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 FEM1CQ96JP0 617 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 FCRL4Q96PJ5 515 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 KCNC2Q96PR1 638 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 RAD9AQ99638 391 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 THUMPD3Q9BV44 507 aaKnown RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 IFIH1Q9BYX4 1025 aaKnown RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 UBXN6Q9BZV1 441 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 KLHL4Q9C0H6 718 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 NDST4Q9H3R1 872 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 HIPK3Q9H422 1215 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 LIN7BQ9HAP6 207 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 RAD18Q9NS91 495 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 THAP1Q9NVV9 213 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 MRPL39Q9NYK5 338 aaKnown RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 PKD2L2Q9NZM6 624 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 BAIAP2L1Q9UHR4 511 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 DNAI1Q9UI46 699 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 ANGEL1Q9UNK9 670 aaKnown RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 AKT3Q9Y243 479 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 USP16Q9Y5T5 823 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 TAF6LQ9Y6J9 622 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 FPGT-TNNI3KV9GXZ4 949 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 RGPD8O14715 1765 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-211ENST00000562199 COL15A1P39059 1388 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 PALLDQ8WX93 1383 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 HEG1Q9ULI3 1381 aa5.64□□□□□ -1.51
CAPN3-211ENST00000562199 KIF1AQ12756 1690 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 FAM170BA6NMN3 283 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 ERVV-2B6SEH9 535 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 SPECC1L-ADORA2AF8WAN1 911 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 SH2B2O14492 632 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-211ENST00000562199 ATP2A1O14983 1001 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 CD3EAPO15446 510 aaKnown RBP5.63□□□□□ -1.51
CAPN3-211ENST00000562199 FFAR2O15552 330 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 CYP26A1O43174 497 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 TBC1D4O60343 1298 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 DTNBO60941 627 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 SMIM24O75264 130 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 KRT37O76014 449 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 TMEM63AO94886 807 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 ACAA1P09110 424 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-211ENST00000562199 CLTAP09496 248 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 STAG3L3P0CL85 134 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 CSH1P0DML2 217 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 CSH2P0DML3 217 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 RARBP10826 455 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 GHRP10912 638 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 CYP19A1P11511 503 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-211ENST00000562199 HOXB8P17481 243 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-211ENST00000562199 RXRAP19793 462 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 RAB6AP20340 208 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 FUT4P22083 530 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 NMT1P30419 496 aaKnown RBP5.63□□□□□ -1.51
CAPN3-211ENST00000562199 GPR3P46089 330 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 ZNF81P51508 661 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 ATXN3P54252 364 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-211ENST00000562199 OCRLQ01968 901 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 LMAN2Q12907 356 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 CHAF1BQ13112 559 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 GPM6BQ13491 265 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 ZNF460Q14592 562 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 SLC39A14Q15043 492 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 POU4F3Q15319 338 aa5.63□□□□□ -1.51
CAPN3-211ENST00000562199 RPS6KA2Q15349 733 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms