RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 RPL17P18621 184 aaKnown RBP11.86□□□□□ -0.51
PCAT1-202ENST00000561978 HNRNPH1P31943 449 aaKnown RBP11.86□□□□□ -0.51
PCAT1-202ENST00000561978 ETV4P43268 484 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 NRIP1P48552 1158 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 SPDYAQ5MJ70 313 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 BRMS1LQ5PSV4 323 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 PRSS55Q6UWB4 352 aaPredicted RBP11.86□□□□□ -0.51
PCAT1-202ENST00000561978 SPATA2LQ8IUW3 424 aaPredicted RBP11.86□□□□□ -0.51
PCAT1-202ENST00000561978 MPP5Q8N3R9 675 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 FITM2Q8N6M3 262 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 MRPL43Q8N983 215 aaKnown RBP11.86□□□□□ -0.51
PCAT1-202ENST00000561978 EDEM1Q92611 657 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 LRRC37BQ96QE4 947 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 TTPALQ9BTX7 342 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 NSUN3Q9H649 340 aaKnown RBP11.86□□□□□ -0.51
PCAT1-202ENST00000561978 SLCO1B3Q9NPD5 702 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 MRPL17Q9NRX2 175 aaKnown RBP11.86□□□□□ -0.51
PCAT1-202ENST00000561978 TMEM30AQ9NV96 361 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 LMCD1Q9NZU5 365 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 SLC17A7Q9P2U7 560 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 LHX6Q9UPM6 363 aa11.86□□□□□ -0.51
PCAT1-202ENST00000561978 MAGEB16A2A368 324 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 WDR27A2RRH5 827 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 FAM72CH0Y354 149 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 KLF11O14901 512 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 TGDSO95455 350 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 IL1BP01584 269 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 POLBP06746 335 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 PSMB4P28070 264 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 EPHB2P29323 1055 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 CCNFP41002 786 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 GRIA1P42261 906 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 YWHAHQ04917 246 aaPredicted RBP11.85□□□□□ -0.51
PCAT1-202ENST00000561978 GALNT2Q10471 571 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 SKIV2LQ15477 1246 aaKnown RBP11.85□□□□□ -0.51
PCAT1-202ENST00000561978 SPANXN3Q5MJ09 141 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 FAM72AQ5TYM5 149 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 FAM72DQ6L9T8 149 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 MARK2Q7KZI7 788 aaKnown RBP11.85□□□□□ -0.51
PCAT1-202ENST00000561978 OTOAQ7RTW8 1153 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 FAM72BQ86X60 149 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 ZNF276Q8N554 614 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 MAFAQ8NHW3 353 aaPredicted RBP11.85□□□□□ -0.51
PCAT1-202ENST00000561978 ACMSDQ8TDX5 336 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 OXNAD1Q96HP4 312 aaPredicted RBP11.85□□□□□ -0.51
PCAT1-202ENST00000561978 FAM111AQ96PZ2 611 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 HAPLN3Q96S86 360 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 SRPK1Q96SB4 655 aaKnown RBP11.85□□□□□ -0.51
PCAT1-202ENST00000561978 ECT2Q9H8V3 914 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 RYDENQ9NUL5 291 aaKnown RBP11.85□□□□□ -0.51
PCAT1-202ENST00000561978 TXLNGQ9NUQ3 528 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 PLLPQ9Y342 182 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.85□□□□□ -0.51
PCAT1-202ENST00000561978 WDR91A4D1P6 747 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 RFPL1O75677 317 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 AP2A1O95782 977 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 CNPP09543 421 aaKnown RBP11.85□□□□□ -0.51
PCAT1-202ENST00000561978 PTPN3P26045 913 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 CRHR1P34998 444 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 DSG1Q02413 1049 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 PRPSAP1Q14558 356 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 STXBP5Q5T5C0 1151 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 BTBD8Q5XKL5 378 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 ATG16L1Q676U5 607 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 DCP1BQ8IZD4 617 aaKnown RBP11.85□□□□□ -0.51
PCAT1-202ENST00000561978 LZTR1Q8N653 840 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 RAB3IL1Q8TBN0 382 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 ATP2A3Q93084 1043 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 RMDN2Q96LZ7 410 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 HERC2P3Q9BVR0 1158 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 TSSK1BQ9BXA7 367 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 TRIM55Q9BYV6 548 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 TLE6Q9H808 572 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 SMYD2Q9NRG4 433 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 BFARQ9NZS9 450 aa11.85□□□□□ -0.51
PCAT1-202ENST00000561978 CSH1P0DML2 217 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 CSH2P0DML3 217 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 FGFR3P22607 806 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 MGAT1P26572 445 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 GRIK1P39086 918 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 GARSP41250 739 aaKnown RBP11.84□□□□□ -0.51
PCAT1-202ENST00000561978 SERPINB4P48594 390 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 NPY2RP49146 381 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 SESN2P58004 480 aaPredicted RBP11.84□□□□□ -0.51
PCAT1-202ENST00000561978 HYAL1Q12794 435 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 ELAVL2Q12926 359 aaKnown RBP11.84□□□□□ -0.51
PCAT1-202ENST00000561978 FRG1Q14331 258 aaKnown RBP11.84□□□□□ -0.51
PCAT1-202ENST00000561978 DBN1Q16643 649 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 TEX44Q53QW1 395 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 CYB5D1Q6P9G0 228 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 TRMT10BQ6PF06 316 aaKnown RBP11.84□□□□□ -0.51
PCAT1-202ENST00000561978 CCDC91Q7Z6B0 441 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 TAC4Q86UU9 113 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 LRRTM3Q86VH5 581 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 OR10T2Q8NGX3 314 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 DQX1Q8TE96 717 aaKnown RBP11.84□□□□□ -0.51
PCAT1-202ENST00000561978 LRRC40Q9H9A6 602 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 ANLNQ9NQW6 1124 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 TMLHEQ9NVH6 421 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 ARHGEF38Q9NXL2 777 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms