RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 UNQ6494/PRO21346Q6UXR6 183 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 LINGO4Q6UY18 593 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TRIM72Q6ZMU5 477 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 RAB44Q7Z6P3 723 aaPredicted RBP10.54□□□□□ -0.72
CLK3-205ENST00000561673 GLRX5Q86SX6 157 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TBC1D3Q8IZP1 549 aaPredicted RBP10.54□□□□□ -0.72
CLK3-205ENST00000561673 PNPLA1Q8N8W4 532 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 OR7D4Q8NG98 312 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 OR2A12Q8NGT7 310 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 JOSD2Q8TAC2 188 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 PIP4K2CQ8TBX8 421 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 RHBDD1Q8TEB9 315 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 FAM131CQ96AQ9 280 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 ERGIC2Q96RQ1 377 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 C11orf70Q9BRQ4 267 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TMEM121BQ9BXQ6 578 aaPredicted RBP10.54□□□□□ -0.72
CLK3-205ENST00000561673 ACE2Q9BYF1 805 aaPredicted RBP10.54□□□□□ -0.72
CLK3-205ENST00000561673 MAGEB5Q9BZ81 275 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 KDM4CQ9H3R0 1056 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 ADAM22Q9P0K1 906 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 ARHGAP20Q9P2F6 1191 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 PPARGC1AQ9UBK2 798 aaKnown RBP10.54□□□□□ -0.72
CLK3-205ENST00000561673 ZNF212Q9UDV6 495 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 OR12D3Q9UGF7 316 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 KLK13Q9UKR3 277 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 BTBD3Q9Y2F9 522 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 USP24Q9UPU5 2620 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 A0A1W2PR77 199 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 ILVBLA1L0T0 632 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 C1QTNF3-AMACRE9PGA6 284 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 H0Y8X5 98 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 ALOX15BO15296 676 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 SLC7A4O43246 635 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 LATO43561 262 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 PLRG1O43660 514 aaKnown RBP10.53□□□□□ -0.72
CLK3-205ENST00000561673 ZNF821O75541 412 aaPredicted RBP10.53□□□□□ -0.72
CLK3-205ENST00000561673 FTH1P19P0C7X4 201 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 KRT3P12035 628 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 CD38P28907 300 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 SDC4P31431 198 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 NSFP46459 744 aaKnown RBP10.53□□□□□ -0.72
CLK3-205ENST00000561673 C21orf59P57076 290 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 PPP2CBP62714 309 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 PPP2CAP67775 309 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 IL9RQ01113 521 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 PRAMEF14Q5SWL7 426 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 AGBL4Q5VU57 503 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 ZNF783Q6ZMS7 281 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 SLCO6A1Q86UG4 719 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 PHF13Q86YI8 300 aaPredicted RBP10.53□□□□□ -0.72
CLK3-205ENST00000561673 AOPEPQ8N6M6 819 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 DCAF4L2Q8NA75 395 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 BAHD1Q8TBE0 780 aaPredicted RBP10.53□□□□□ -0.72
CLK3-205ENST00000561673 CENPIQ92674 756 aaPredicted RBP10.53□□□□□ -0.72
CLK3-205ENST00000561673 GATA6Q92908 595 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 SERAC1Q96JX3 654 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 SPON2Q9BUD6 331 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 ZYG11BQ9C0D3 744 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 AASDHPPTQ9NRN7 309 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 TMEM63CQ9P1W3 806 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 MSRB2Q9Y3D2 182 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 NEUROG3Q9Y4Z2 214 aa10.53□□□□□ -0.72
CLK3-205ENST00000561673 MAP1BP46821 2468 aaKnown RBP10.53□□□□□ -0.72
CLK3-205ENST00000561673 FAM221BA6H8Z2 402 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 FAM72CH0Y354 149 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 RNF103O00237 685 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 CBX4O00257 560 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 FLRT2O43155 660 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 TEX33O43247 280 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 PCDHGA12O60330 932 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 DFNA5O60443 496 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 ZMPSTE24O75844 475 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 MAT2AP31153 395 aaKnown RBP10.52□□□□□ -0.73
CLK3-205ENST00000561673 CHRNA3P32297 505 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 RFC1P35251 1148 aaPredicted RBP10.52□□□□□ -0.73
CLK3-205ENST00000561673 PTPN9P43378 593 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 CCT8P50990 548 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 CLCN6P51797 869 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 HDAC4P56524 1084 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 GSCP56915 257 aaPredicted RBP10.52□□□□□ -0.73
CLK3-205ENST00000561673 TAS2R38P59533 333 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 NRG1Q02297 640 aaPredicted RBP10.52□□□□□ -0.73
CLK3-205ENST00000561673 ARL13BQ3SXY8 428 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 ANO6Q4KMQ2 910 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 ARSIQ5FYB1 569 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 FAM72AQ5TYM5 149 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 FAM72DQ6L9T8 149 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 RWDD4Q6NW29 188 aaKnown RBP10.52□□□□□ -0.73
CLK3-205ENST00000561673 WDR59Q6PJI9 974 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 STRADAQ7RTN6 431 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 PRPF39Q86UA1 669 aaKnown RBP10.52□□□□□ -0.73
CLK3-205ENST00000561673 FAM72BQ86X60 149 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 DRC7Q8IY82 874 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 CCDC185Q8N715 623 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 KDF1Q8NAX2 398 aaPredicted RBP10.52□□□□□ -0.73
CLK3-205ENST00000561673 CHST14Q8NCH0 376 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 TMIEQ8NEW7 156 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 FAM172AQ8WUF8 416 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 ADAMTS14Q8WXS8 1223 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 SKA1Q96BD8 255 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms