RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PMS2P3Q13401 168 aa16.77■□□□□ 0.27
TPM1-228ENST00000560975 KIZQ2M2Z5 673 aa16.77■□□□□ 0.27
TPM1-228ENST00000560975 PITRM1Q5JRX3 1037 aa16.77■□□□□ 0.27
TPM1-228ENST00000560975 MAMDC4Q6UXC1 1216 aa16.77■□□□□ 0.27
TPM1-228ENST00000560975 C4orf22Q6V702 233 aa16.77■□□□□ 0.27
TPM1-228ENST00000560975 SCUBE3Q8IX30 993 aa16.77■□□□□ 0.27
TPM1-228ENST00000560975 CPSF7Q8N684 471 aaKnown RBP16.77■□□□□ 0.27
TPM1-228ENST00000560975 CCNYL1Q8N7R7 359 aa16.77■□□□□ 0.27
TPM1-228ENST00000560975 C12orf29Q8N999 325 aa16.77■□□□□ 0.27
TPM1-228ENST00000560975 QKIQ96PU8 341 aaKnown RBP eCLIP16.77■□□□□ 0.271e-8■■■■■ 42
TPM1-228ENST00000560975 ZNF385DQ9H6B1 395 aa16.77■□□□□ 0.27
TPM1-228ENST00000560975 RNF146Q9NTX7 359 aa16.77■□□□□ 0.27
TPM1-228ENST00000560975 MORF4L1Q9UBU8 362 aa16.77■□□□□ 0.27
TPM1-228ENST00000560975 CCDC78A2IDD5 438 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 HTR3EA5X5Y0 456 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 NRP1O14786 923 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 PAPSS1O43252 624 aaPredicted RBP16.76■□□□□ 0.27
TPM1-228ENST00000560975 TADA2AO75478 443 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 AVPR1AP37288 418 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 PRKCQQ04759 706 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 DGKDQ16760 1214 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 NHSL2Q5HYW2 709 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 LRRC8EQ6NSJ5 796 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 NEURL2Q9BR09 285 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 ZNF670Q9BS34 389 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 DTLQ9NZJ0 730 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 CPSF3Q9UKF6 684 aaKnown RBP16.76■□□□□ 0.27
TPM1-228ENST00000560975 SLC39A10Q9ULF5 831 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 TRIM17Q9Y577 477 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 RBM47A0AV96 593 aaKnown RBP16.76■□□□□ 0.27
TPM1-228ENST00000560975 FAM149AA5PLN7 773 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 TPST1O60507 370 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 C8BP07358 591 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 SP2Q02086 613 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 GHRHRQ02643 423 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 NME3Q13232 169 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 MAP1SQ66K74 1059 aaPredicted RBP16.76■□□□□ 0.27
TPM1-228ENST00000560975 FAM151AQ8WW52 585 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 C8orf37Q96NL8 207 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 SLX1AQ9BQ83 275 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 MRPL4Q9BYD3 311 aaKnown RBP16.76■□□□□ 0.27
TPM1-228ENST00000560975 DRC3Q9H069 523 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 SMOXQ9NWM0 555 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 ZNF70Q9UC06 446 aaPredicted RBP16.76■□□□□ 0.27
TPM1-228ENST00000560975 KIAA1217Q5T5P2 1943 aa16.76■□□□□ 0.27
TPM1-228ENST00000560975 A0A0A0MRY4 1105 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 PRORSD1PA6NEY8 169 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 H0YJX3 145 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 PHGDHO43175 533 aaKnown RBP16.75■□□□□ 0.27
TPM1-228ENST00000560975 CXCL8P10145 99 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 TMED10P49755 219 aaKnown RBP16.75■□□□□ 0.27
TPM1-228ENST00000560975 CNTD1Q8N815 330 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 OR52K1Q8NGK4 314 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 SPATA13Q96N96 652 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 B3GNT5Q9BYG0 378 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 SIX4Q9UIU6 781 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 TSPAN16Q9UKR8 245 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 MSCO60682 206 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 ITGB3P05106 788 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 LIMK2P53671 638 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 Q3C1V9 767 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 EGFLAMQ63HQ2 1017 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 CHST15Q7LFX5 561 aaPredicted RBP16.75■□□□□ 0.27
TPM1-228ENST00000560975 PYROXD2Q8N2H3 581 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 CBR4Q8N4T8 237 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 TFAP2CQ92754 450 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 NPLQ9BXD5 320 aaPredicted RBP16.75■□□□□ 0.27
TPM1-228ENST00000560975 TMEM134Q9H6X4 195 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 POLR1BQ9H9Y6 1135 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 TRPC7Q9HCX4 862 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 HEATR9A2RTY3 570 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 RNF103O00237 685 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 CILPO75339 1184 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 CDH3P22223 829 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 EIF2B2P49770 351 aaKnown RBP16.75■□□□□ 0.27
TPM1-228ENST00000560975 PRKAA1Q13131 559 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 RFTN1Q14699 578 aaPredicted RBP16.75■□□□□ 0.27
TPM1-228ENST00000560975 HERC3Q15034 1050 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 NEDD8Q15843 81 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 FAM219BQ5XKK7 198 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 RWDD4Q6NW29 188 aaKnown RBP16.75■□□□□ 0.27
TPM1-228ENST00000560975 SPATA6LQ8N4H0 392 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 CCNYQ8ND76 341 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 SLC39A3Q9BRY0 314 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 GGA3Q9NZ52 723 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 AURKCQ9UQB9 309 aa16.75■□□□□ 0.27
TPM1-228ENST00000560975 NFICP08651 508 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 MLNP12872 115 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 ZNF12P17014 697 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 BMXP51813 675 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 GNA12Q03113 381 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 NSUN2Q08J23 767 aaKnown RBP eCLIP16.74■□□□□ 0.27
TPM1-228ENST00000560975 TRAF2Q12933 501 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 NAB1Q13506 487 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 RAB39AQ14964 217 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 NR1D2Q14995 579 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 LIPMQ5VYY2 423 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 ZPBP2Q6X784 338 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 OFCC1Q8IZS5 231 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 CANT1Q8WVQ1 401 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms