RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ERVMER34-1Q9H9K5 563 aa13.94□□□□□ -0.18
SMAD3-214ENST00000560402 LUC7LQ9NQ29 371 aaKnown RBP13.94□□□□□ -0.18
SMAD3-214ENST00000560402 DMTF1Q9Y222 760 aa13.94□□□□□ -0.18
SMAD3-214ENST00000560402 GPSM3Q9Y4H4 160 aa13.94□□□□□ -0.18
SMAD3-214ENST00000560402 GOLGA4Q13439 2230 aaKnown RBP13.94□□□□□ -0.18
SMAD3-214ENST00000560402 GOLGA8CPA6NN73 597 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 PLRG1O43660 514 aaKnown RBP13.93□□□□□ -0.18
SMAD3-214ENST00000560402 ATP9BO43861 1147 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 CLDN11O75508 207 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 ITGAVP06756 1048 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 C1SP09871 688 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 SLC9A1P19634 815 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 EPHA8P29322 1005 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-214ENST00000560402 NOS2P35228 1153 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 NXPH1P58417 271 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 IL9RQ01113 521 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 OVGP1Q12889 678 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 TAF5Q15542 800 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 KCNT1Q5JUK3 1230 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 BRMS1LQ5PSV4 323 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 GJB7Q6PEY0 223 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 FAM183BPQ6ZVS7 135 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 PRPF39Q86UA1 669 aaKnown RBP13.93□□□□□ -0.18
SMAD3-214ENST00000560402 TMPRSS12Q86WS5 348 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 TRIM69Q86WT6 500 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 CIR1Q86X95 450 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-214ENST00000560402 PASD1Q8IV76 773 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 SERAC1Q96JX3 654 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 CCDC114Q96M63 670 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 EBF2Q9HAK2 575 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 ACP6Q9NPH0 428 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 SCUBE2Q9NQ36 999 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 STAP1Q9ULZ2 295 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 SIK3Q9Y2K2 1263 aa13.93□□□□□ -0.18
SMAD3-214ENST00000560402 DOCK4Q8N1I0 1966 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 ATRXP46100 2492 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 SYNJ2BP-COX16A0A087WUM0 186 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-214ENST00000560402 SOWAHDA6NJG2 315 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 USP27XA6NNY8 438 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 KCNK3O14649 394 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 ENC1O14682 589 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 KIF5CO60282 957 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 RFPL3O75679 317 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 WNT1P04628 370 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 PON1P27169 355 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 HNF1BP35680 557 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 SCNN1AP37088 669 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 RXRGP48443 463 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 CDH4P55283 916 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 BPIFB4P59827 614 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 ETF1P62495 437 aaKnown RBP13.92□□□□□ -0.18
SMAD3-214ENST00000560402 PPP2CBP62714 309 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 PPP2CAP67775 309 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 CENPCQ03188 943 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 ZNF177Q13360 481 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-214ENST00000560402 SPA17Q15506 151 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 C5orf22Q49AR2 442 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 PTPN20Q4JDL3 420 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 OR6B2Q6IFH4 312 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 WDTC1Q8N5D0 677 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 PDCD7Q8N8D1 485 aaKnown RBP13.92□□□□□ -0.18
SMAD3-214ENST00000560402 MFSD2AQ8NA29 543 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 MDM1Q8TC05 714 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 SAP25Q8TEE9 199 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 ALG14Q96F25 216 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 TTYH3Q9C0H2 523 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 DEF6Q9H4E7 631 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 SYNCQ9H7C4 482 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 PREBQ9HCU5 417 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 FAM207AQ9NSI2 230 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-214ENST00000560402 COX16Q9P0S2 106 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 VPS28Q9UK41 221 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 VANGL2Q9ULK5 521 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 HS3ST2Q9Y278 367 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 TBC1D30Q9Y2I9 924 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 FARP1Q9Y4F1 1045 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-214ENST00000560402 HS3ST4Q9Y661 456 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 NBEAQ8NFP9 2946 aa13.92□□□□□ -0.18
SMAD3-214ENST00000560402 TBC1D3DA0A087WVF3 549 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 TBC1D3IA0A087WXS9 549 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 TBC1D3EA0A087X179 549 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 TBC1D3KA0A087X1G2 549 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 TBC1D3FA6NER0 549 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-214ENST00000560402 TBC1D3LB9A6J9 549 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 TLR4O00206 839 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 MCF2LO15068 1137 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 LDOC1O95751 146 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-214ENST00000560402 ERBB2P04626 1255 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 TBC1D3HP0C7X1 549 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 VAV1P15498 845 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 SLC6A3Q01959 620 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 CCDC15Q0P6D6 951 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 NME3Q13232 169 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 CAMK2BQ13554 666 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 AUHQ13825 339 aaKnown RBP13.91□□□□□ -0.18
SMAD3-214ENST00000560402 SETMARQ53H47 684 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-214ENST00000560402 AGBL4Q5VU57 503 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 TBC1D3GQ6DHY5 549 aa13.91□□□□□ -0.18
SMAD3-214ENST00000560402 TBC1D3CQ6IPX1 549 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms