RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 MAPK4P31152 587 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 HOXA11P31270 313 aaPredicted RBP6.41□□□□□ -1.38
USP8-210ENST00000560379 SHMT1P34896 483 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 GPC3P51654 580 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 UCP3P55916 312 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 ERVFRD-1P60508 538 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 POU6F2P78424 691 aaPredicted RBP6.41□□□□□ -1.38
USP8-210ENST00000560379 SMAD4Q13485 552 aaKnown RBP6.41□□□□□ -1.38
USP8-210ENST00000560379 NR1I3Q14994 352 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 ADIPOQQ15848 244 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 CTXN3Q4LDR2 81 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 PABPC1LQ4VXU2 614 aaKnown RBP6.41□□□□□ -1.38
USP8-210ENST00000560379 CEP55Q53EZ4 464 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 TMEM200BQ69YZ2 307 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 MCTP2Q6DN12 878 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 OTUD7BQ6GQQ9 843 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 CTR9Q6PD62 1173 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 DCLRE1AQ6PJP8 1040 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 USP17L6PQ6QN14 398 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 TMEM179Q6ZVK1 233 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 PLEKHM3Q6ZWE6 761 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 TMTC3Q6ZXV5 915 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 OTOP2Q7RTS6 562 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 ZNF589Q86UQ0 364 aaPredicted RBP6.41□□□□□ -1.38
USP8-210ENST00000560379 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.41□□□□□ -1.38
USP8-210ENST00000560379 STPG3Q8N7X2 389 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 DRAXINQ8NBI3 349 aaPredicted RBP6.41□□□□□ -1.38
USP8-210ENST00000560379 KCTD6Q8NC69 237 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 ZBTB44Q8NCP5 570 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 OR6Y1Q8NGX8 325 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 MZB1Q8WU39 189 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 SHC3Q92529 594 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 ZKSCAN4Q969J2 545 aaPredicted RBP6.41□□□□□ -1.38
USP8-210ENST00000560379 SDCCAG3Q96C92 435 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 NEIL1Q96FI4 390 aaPredicted RBP6.41□□□□□ -1.38
USP8-210ENST00000560379 VPS39Q96JC1 886 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 FAM227BQ96M60 508 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 ZNF396Q96N95 335 aaPredicted RBP6.41□□□□□ -1.38
USP8-210ENST00000560379 DNAI2Q9GZS0 605 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 PRDM13Q9H4Q3 707 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 EPS8L2Q9H6S3 715 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 KLHL14Q9P2G3 628 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 FZD1Q9UP38 647 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 N6AMT1Q9Y5N5 214 aa6.41□□□□□ -1.38
USP8-210ENST00000560379 A0A0G2JNJ9 132 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 MYO1CO00159 1063 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 RAB27BO00194 218 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 AP3B1O00203 1094 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 CACNB4O00305 520 aaPredicted RBP6.4□□□□□ -1.38
USP8-210ENST00000560379 MCF2LO15068 1137 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 CTAGE5O15320 804 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 TSC22D2O75157 780 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 DNAJB5O75953 348 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 ALDH1A2O94788 518 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 OPN1MWP04001 364 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 GRPP07492 148 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 GJB1P08034 283 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 OPN1MW2P0DN77 364 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 OPN1MW3P0DN78 364 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 HSPD1P10809 573 aaKnown RBP6.4□□□□□ -1.38
USP8-210ENST00000560379 ACADMP11310 421 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 CKBP12277 381 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 TNNT1P13805 278 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 PECAM1P16284 738 aaPredicted RBP6.4□□□□□ -1.38
USP8-210ENST00000560379 IFNAR1P17181 557 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 CHMLP26374 656 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 ACVR2AP27037 513 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 KRT2P35908 639 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 ASMTP46597 345 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 ALDH1A3P47895 512 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 PLCD1P51178 756 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 ARFIP1P53367 373 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 WNT3AP56704 352 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 SLC26A5P58743 744 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 CREB5Q02930 508 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 SCAPQ12770 1279 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 TRIM71Q2Q1W2 868 aaKnown RBP6.4□□□□□ -1.38
USP8-210ENST00000560379 CERKLQ49MI3 558 aaPredicted RBP6.4□□□□□ -1.38
USP8-210ENST00000560379 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.4□□□□□ -1.38
USP8-210ENST00000560379 SHQ1Q6PI26 577 aaKnown RBP6.4□□□□□ -1.38
USP8-210ENST00000560379 CWC27Q6UX04 472 aaKnown RBP6.4□□□□□ -1.38
USP8-210ENST00000560379 ZDHHC24Q6UX98 284 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 RPTNQ6XPR3 784 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 BBS12Q6ZW61 710 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 RRAGAQ7L523 313 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 ZC3H18Q86VM9 953 aaKnown RBP6.4□□□□□ -1.38
USP8-210ENST00000560379 CCDC28AQ8IWP9 274 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 CTCFLQ8NI51 663 aaPredicted RBP6.4□□□□□ -1.38
USP8-210ENST00000560379 EXOC4Q96A65 974 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 FEM1CQ96JP0 617 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 TRAPPC9Q96Q05 1148 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 ATP6V0BQ99437 205 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 LZTS2Q9BRK4 669 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 CRACR2AQ9BSW2 395 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 TWSG1Q9GZX9 223 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 TNMDQ9H2S6 317 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 TP63Q9H3D4 680 aaPredicted RBP6.4□□□□□ -1.38
USP8-210ENST00000560379 RNF41Q9H4P4 317 aaPredicted RBP6.4□□□□□ -1.38
USP8-210ENST00000560379 RABEP2Q9H5N1 569 aa6.4□□□□□ -1.38
USP8-210ENST00000560379 SH2D4AQ9H788 454 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms