RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 PLEKHA4Q9H4M7 779 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 ARFGAP3Q9NP61 516 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 TMLHEQ9NVH6 421 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.12□□□□□ -1.11
LINC00520-206ENST00000560336 RASAL2Q9UJF2 1139 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 RAB21Q9UL25 225 aa8.12□□□□□ -1.11
LINC00520-206ENST00000560336 NYNRINQ9P2P1 1898 aaKnown RBP8.12□□□□□ -1.11
LINC00520-206ENST00000560336 TCRBV7S2A1N4TA0A589 114 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 CCDC151A5D8V7 595 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 TRIM43BA6NCK2 446 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 H7C4K7 107 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 CAPN9O14815 690 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 KIAA0355O15063 1070 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 HSF2BPO75031 334 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 EFCAB14O75071 495 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 GALTP07902 379 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 OR4Q2P0C623 313 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 RALAP11233 206 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 CSF2RAP15509 400 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 TACR1P25103 407 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 CHRNA3P32297 505 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 PCK1P35558 622 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 PTPN9P43378 593 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 RPL34P49207 117 aaKnown RBP8.11□□□□□ -1.11
LINC00520-206ENST00000560336 ALDH7A1P49419 539 aaKnown RBP8.11□□□□□ -1.11
LINC00520-206ENST00000560336 NDUFV1P49821 464 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 SULT1E1P49888 294 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 ARPP19P56211 112 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 LINC00310P59036 64 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 MRPS5P82675 430 aaKnown RBP8.11□□□□□ -1.11
LINC00520-206ENST00000560336 DR1Q01658 176 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 GUCY2DQ02846 1103 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 SLC25A11Q02978 314 aaKnown RBP8.11□□□□□ -1.11
LINC00520-206ENST00000560336 DHX34Q14147 1143 aaKnown RBP8.11□□□□□ -1.11
LINC00520-206ENST00000560336 KRT81Q14533 505 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 FXNQ16595 210 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 SMTNL2Q2TAL5 461 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 CCDC14Q49A88 953 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 KAZNQ674X7 775 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 TXNRD3NBQ6F5E7 133 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 TRNP1Q6NT89 227 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 WDR93Q6P2C0 686 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 POMZP3Q6PJE2 187 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 CCDC137Q6PK04 289 aaKnown RBP8.11□□□□□ -1.11
LINC00520-206ENST00000560336 MFSD7Q6UXD7 560 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 RPTNQ6XPR3 784 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 LRRTM3Q86VH5 581 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 SCN4BQ8IWT1 228 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 CCDC105Q8IYK2 499 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 KCTD6Q8NC69 237 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 NDRG1Q92597 394 aaKnown RBP8.11□□□□□ -1.11
LINC00520-206ENST00000560336 TRIM43Q96BQ3 446 aaPredicted RBP8.11□□□□□ -1.11
LINC00520-206ENST00000560336 KCNK16Q96T55 309 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 PKMYT1Q99640 499 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 UBXN6Q9BZV1 441 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 ZCWPW1Q9H0M4 648 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 CNTD2Q9H8S5 307 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 EPB41L5Q9HCM4 733 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 DMAP1Q9NPF5 467 aaPredicted RBP8.11□□□□□ -1.11
LINC00520-206ENST00000560336 CNGB3Q9NQW8 809 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.11□□□□□ -1.11
LINC00520-206ENST00000560336 AMACRQ9UHK6 382 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 STAP1Q9ULZ2 295 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 USP18Q9UMW8 372 aa8.11□□□□□ -1.11
LINC00520-206ENST00000560336 COL4A4P53420 1690 aaPredicted RBP8.11□□□□□ -1.11
LINC00520-206ENST00000560336 SYNJ2BP-COX16A0A087WUM0 186 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 OR6C75A6NL08 312 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 TTI1O43156 1089 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 DGKIO75912 1065 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 SEC31AO94979 1220 aaKnown RBP8.1□□□□□ -1.11
LINC00520-206ENST00000560336 TJP3O95049 919 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 OAZ2O95190 189 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 ZBED1O96006 694 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 LTFP02788 710 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 KRT10P13645 584 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 KDELR1P24390 212 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 CYP2F1P24903 491 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 COILP38432 576 aaPredicted RBP8.1□□□□□ -1.11
LINC00520-206ENST00000560336 PBX3P40426 434 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 MATKP42679 507 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 TNNT3P45378 269 aaPredicted RBP8.1□□□□□ -1.11
LINC00520-206ENST00000560336 CACNA2D1P54289 1103 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 DAOAP59103 153 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 YWHAZP63104 245 aaKnown RBP8.1□□□□□ -1.11
LINC00520-206ENST00000560336 IFRD2Q12894 506 aaPredicted RBP8.1□□□□□ -1.11
LINC00520-206ENST00000560336 SNX1Q13596 522 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 NFE2Q16621 373 aaPredicted RBP8.1□□□□□ -1.11
LINC00520-206ENST00000560336 DCAF6Q58WW2 860 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 TFDP3Q5H9I0 405 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 KCNT1Q5JUK3 1230 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 BICRALQ6AI39 1079 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 GTF2IRD2BQ6EKJ0 949 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 MRM1Q6IN84 353 aaKnown RBP8.1□□□□□ -1.11
LINC00520-206ENST00000560336 MFSD5Q6N075 450 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 ARCQ7LC44 396 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 MTERF4Q7Z6M4 381 aaKnown RBP8.1□□□□□ -1.11
LINC00520-206ENST00000560336 GTF2IRD2Q86UP8 949 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 RFX6Q8HWS3 928 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 DEFB106AQ8N104 65 aa8.1□□□□□ -1.11
LINC00520-206ENST00000560336 ARFGAP1Q8N6T3 406 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms