RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SMARCD1Q96GM5 515 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 MCMBPQ9BTE3 642 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 WDR55Q9H6Y2 383 aaPredicted RBP10.22□□□□□ -0.77
LRRC28-216ENST00000559819 SLC24A3Q9HC58 644 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 NUDT5Q9UKK9 219 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 SORCS3Q9UPU3 1222 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 LRCH1Q9Y2L9 728 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 PTCH2Q9Y6C5 1203 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 NUP205Q92621 2012 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 F8W810 466 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 MSI1O43347 362 aaKnown RBP10.22□□□□□ -0.77
LRRC28-216ENST00000559819 CELF2O95319 508 aaKnown RBP10.22□□□□□ -0.77
LRRC28-216ENST00000559819 SBK3P0C264 359 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 GABRB3P28472 473 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 NPY2RP49146 381 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 CCNIQ14094 377 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 TCHHL1Q5QJ38 904 aaPredicted RBP10.22□□□□□ -0.77
LRRC28-216ENST00000559819 DENND6AQ8IWF6 608 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 DEFB107AQ8IZN7 70 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 TMEM86AQ8N2M4 240 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 IPMKQ8NFU5 416 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 KCTD4Q8WVF5 259 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 YIPF3Q9GZM5 350 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 NDFIP2Q9NV92 336 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 SLC38A7Q9NVC3 462 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 NDE1Q9NXR1 346 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 DLGAP2Q9P1A6 1054 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 TRHDEQ9UKU6 1024 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 NEU3Q9UQ49 428 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 TRPV2Q9Y5S1 764 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 RAD54BQ9Y620 910 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 DNAH12Q6ZR08 3092 aa10.22□□□□□ -0.77
LRRC28-216ENST00000559819 CHRNA1P02708 482 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 SKIP12755 728 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 HOXC8P31273 242 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 SERPINB6P35237 376 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 CDK7P50613 346 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 AP2B1P63010 937 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 CDH17Q12864 832 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 CTBP1Q13363 440 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 PM20D1Q6GTS8 502 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 GDF6Q6KF10 455 aaPredicted RBP10.21□□□□□ -0.77
LRRC28-216ENST00000559819 IRGCQ6NXR0 463 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 CXCL17Q6UXB2 119 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 IZUMO2Q6UXV1 221 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 RNF111Q6ZNA4 994 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 LRRTM3Q86VH5 581 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 HPS6Q86YV9 775 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 ARHGAP12Q8IWW6 846 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 OR10T2Q8NGX3 314 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 SCYL1Q96KG9 808 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 ZNF184Q99676 751 aaPredicted RBP10.21□□□□□ -0.77
LRRC28-216ENST00000559819 FICDQ9BVA6 458 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 KATNAL1Q9BW62 490 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 FTHL17Q9BXU8 183 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 ACE2Q9BYF1 805 aaPredicted RBP10.21□□□□□ -0.77
LRRC28-216ENST00000559819 IL22Q9GZX6 179 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 AGO3Q9H9G7 860 aaKnown RBP10.21□□□□□ -0.77
LRRC28-216ENST00000559819 SLC2A6Q9UGQ3 507 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 SFMBT1Q9UHJ3 866 aa10.21□□□□□ -0.77
LRRC28-216ENST00000559819 ERI2A8K979 691 aaKnown RBP10.21□□□□□ -0.78
LRRC28-216ENST00000559819 TIMM44O43615 452 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 TRIM13O60858 407 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 F9P00740 461 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 COX4I1P13073 169 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 SERPINB5P36952 375 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 CSE1LP55060 971 aaKnown RBP10.21□□□□□ -0.78
LRRC28-216ENST00000559819 MRPS35P82673 323 aaKnown RBP10.21□□□□□ -0.78
LRRC28-216ENST00000559819 KLF10Q13118 480 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 PRPSAP1Q14558 356 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 USP10Q14694 798 aaKnown RBP10.21□□□□□ -0.78
LRRC28-216ENST00000559819 UPP1Q16831 310 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 LRRC36Q1X8D7 754 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 INTS6LQ5JSJ4 861 aaKnown RBP10.21□□□□□ -0.78
LRRC28-216ENST00000559819 PPM1LQ5SGD2 360 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 ESRP1Q6NXG1 681 aaKnown RBP10.21□□□□□ -0.78
LRRC28-216ENST00000559819 ZC3HC1Q86WB0 502 aaKnown RBP10.21□□□□□ -0.78
LRRC28-216ENST00000559819 MFSD6LQ8IWD5 586 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 TMEM151AQ8N4L1 468 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 PNPLA1Q8N8W4 532 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 C1QTNF1Q9BXJ1 281 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 ATXN3LQ9H3M9 355 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 S100A14Q9HCY8 104 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 OXSMQ9NWU1 459 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 CDH22Q9UJ99 828 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 RUVBL2Q9Y230 463 aaKnown RBP10.21□□□□□ -0.78
LRRC28-216ENST00000559819 CDY1Q9Y6F8 540 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 ZNF236Q9UL36 1845 aa10.21□□□□□ -0.78
LRRC28-216ENST00000559819 IQCA1LA6NCM1 817 aa10.2□□□□□ -0.78
LRRC28-216ENST00000559819 M0QZ92 97 aa10.2□□□□□ -0.78
LRRC28-216ENST00000559819 MTSS1O43312 755 aa10.2□□□□□ -0.78
LRRC28-216ENST00000559819 KIF1CO43896 1103 aaKnown RBP10.2□□□□□ -0.78
LRRC28-216ENST00000559819 MGEA5O60502 916 aa10.2□□□□□ -0.78
LRRC28-216ENST00000559819 B3GAT3O94766 335 aa10.2□□□□□ -0.78
LRRC28-216ENST00000559819 AHSGP02765 367 aa10.2□□□□□ -0.78
LRRC28-216ENST00000559819 FAM163BP0C2L3 166 aa10.2□□□□□ -0.78
LRRC28-216ENST00000559819 UBTFL6P0CB48 400 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-216ENST00000559819 GNAT1P11488 350 aa10.2□□□□□ -0.78
LRRC28-216ENST00000559819 SP100P23497 879 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-216ENST00000559819 EPHA3P29320 983 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms