RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 GPD2P43304 727 aa6□□□□□ -1.45
USP3-215ENST00000559771 GALCP54803 685 aa6□□□□□ -1.45
USP3-215ENST00000559771 CLDN6P56747 220 aa6□□□□□ -1.45
USP3-215ENST00000559771 TBX4P57082 545 aa6□□□□□ -1.45
USP3-215ENST00000559771 SLC8A3P57103 927 aa6□□□□□ -1.45
USP3-215ENST00000559771 IL9RQ01113 521 aa6□□□□□ -1.45
USP3-215ENST00000559771 ZBTB16Q05516 673 aa6□□□□□ -1.45
USP3-215ENST00000559771 HS1BP3Q53T59 392 aa6□□□□□ -1.45
USP3-215ENST00000559771 MS4A13Q5J8X5 152 aa6□□□□□ -1.45
USP3-215ENST00000559771 PITRM1Q5JRX3 1037 aa6□□□□□ -1.45
USP3-215ENST00000559771 TCERG1LQ5VWI1 586 aa6□□□□□ -1.45
USP3-215ENST00000559771 SYPL2Q5VXT5 272 aa6□□□□□ -1.45
USP3-215ENST00000559771 KIAA0895LQ68EN5 471 aa6□□□□□ -1.45
USP3-215ENST00000559771 TTI2Q6NXR4 508 aa6□□□□□ -1.45
USP3-215ENST00000559771 DENND1BQ6P3S1 775 aa6□□□□□ -1.45
USP3-215ENST00000559771 Q6ZS46 218 aa6□□□□□ -1.45
USP3-215ENST00000559771 USP30Q70CQ3 517 aa6□□□□□ -1.45
USP3-215ENST00000559771 RRAGAQ7L523 313 aa6□□□□□ -1.45
USP3-215ENST00000559771 KANSL1Q7Z3B3 1105 aa6□□□□□ -1.45
USP3-215ENST00000559771 PDZD3Q86UT5 571 aa6□□□□□ -1.45
USP3-215ENST00000559771 MFN1Q8IWA4 741 aa6□□□□□ -1.45
USP3-215ENST00000559771 DHX40Q8IX18 779 aaKnown RBP6□□□□□ -1.45
USP3-215ENST00000559771 APCDD1Q8J025 514 aa6□□□□□ -1.45
USP3-215ENST00000559771 SIX6OS1Q8N1H7 587 aa6□□□□□ -1.45
USP3-215ENST00000559771 CFAP52Q8N1V2 620 aa6□□□□□ -1.45
USP3-215ENST00000559771 AADATQ8N5Z0 425 aa6□□□□□ -1.45
USP3-215ENST00000559771 SAP25Q8TEE9 199 aa6□□□□□ -1.45
USP3-215ENST00000559771 RNF139Q8WU17 664 aa6□□□□□ -1.45
USP3-215ENST00000559771 HNRNPLLQ8WVV9 542 aaKnown RBP6□□□□□ -1.45
USP3-215ENST00000559771 IRGQQ8WZA9 623 aa6□□□□□ -1.45
USP3-215ENST00000559771 SNX19Q92543 992 aa6□□□□□ -1.45
USP3-215ENST00000559771 PTPRN2Q92932 1015 aa6□□□□□ -1.45
USP3-215ENST00000559771 IGSF8Q969P0 613 aa6□□□□□ -1.45
USP3-215ENST00000559771 CCDC47Q96A33 483 aaKnown RBP6□□□□□ -1.45
USP3-215ENST00000559771 FAM131CQ96AQ9 280 aa6□□□□□ -1.45
USP3-215ENST00000559771 HSFY1Q96LI6 401 aa6□□□□□ -1.45
USP3-215ENST00000559771 SLC6A18Q96N87 628 aa6□□□□□ -1.45
USP3-215ENST00000559771 GSDMAQ96QA5 445 aa6□□□□□ -1.45
USP3-215ENST00000559771 CDC6Q99741 560 aa6□□□□□ -1.45
USP3-215ENST00000559771 PRMT1Q99873 361 aaKnown RBP6□□□□□ -1.45
USP3-215ENST00000559771 SCAND2PQ9GZW5 306 aaPredicted RBP6□□□□□ -1.45
USP3-215ENST00000559771 BTBD1Q9H0C5 482 aa6□□□□□ -1.45
USP3-215ENST00000559771 NEUROG2Q9H2A3 272 aa6□□□□□ -1.45
USP3-215ENST00000559771 CCDC86Q9H6F5 360 aaKnown RBP6□□□□□ -1.45
USP3-215ENST00000559771 CAAP1Q9H8G2 361 aa6□□□□□ -1.45
USP3-215ENST00000559771 AKTIPQ9H8T0 292 aa6□□□□□ -1.45
USP3-215ENST00000559771 SGK2Q9HBY8 427 aa6□□□□□ -1.45
USP3-215ENST00000559771 ACP6Q9NPH0 428 aa6□□□□□ -1.45
USP3-215ENST00000559771 STIM2Q9P246 746 aa6□□□□□ -1.45
USP3-215ENST00000559771 HESX1Q9UBX0 185 aa6□□□□□ -1.45
USP3-215ENST00000559771 TJP2Q9UDY2 1190 aa6□□□□□ -1.45
USP3-215ENST00000559771 ARMCX3Q9UH62 379 aaPredicted RBP6□□□□□ -1.45
USP3-215ENST00000559771 ADAMTS1Q9UHI8 967 aa6□□□□□ -1.45
USP3-215ENST00000559771 PLA2G4CQ9UP65 541 aa6□□□□□ -1.45
USP3-215ENST00000559771 ERVW-1Q9UQF0 538 aa6□□□□□ -1.45
USP3-215ENST00000559771 NAALADL1Q9UQQ1 740 aa6□□□□□ -1.45
USP3-215ENST00000559771 KNL1Q8NG31 2342 aa6□□□□□ -1.45
USP3-215ENST00000559771 CABIN1Q9Y6J0 2220 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 APC2O95996 2303 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 KALRNO60229 2985 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 COL27A1Q8IZC6 1860 aaPredicted RBP5.99□□□□□ -1.45
USP3-215ENST00000559771 A0A1W2PP55 124 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 M0QYV0 167 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 RNF103O00237 685 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 MID1O15344 667 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 LATO43561 262 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 LUC7L3O95232 432 aaKnown RBP5.99□□□□□ -1.45
USP3-215ENST00000559771 DNTTP04053 509 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 ATP5BP06576 529 aaKnown RBP5.99□□□□□ -1.45
USP3-215ENST00000559771 POLR2EP19388 210 aaKnown RBP5.99□□□□□ -1.45
USP3-215ENST00000559771 TBXAS1P24557 533 aaPredicted RBP5.99□□□□□ -1.45
USP3-215ENST00000559771 DRD3P35462 400 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 SLC11A2P49281 568 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 NUMBP49757 651 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 STK19P49842 368 aaPredicted RBP5.99□□□□□ -1.45
USP3-215ENST00000559771 CCT8P50990 548 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 PPP2CBP62714 309 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 RACK1P63244 317 aaKnown RBP5.99□□□□□ -1.45
USP3-215ENST00000559771 PPP2CAP67775 309 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 GCNT1Q02742 428 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 ARID5AQ03989 594 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 LRRC63Q05C16 580 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 CYP4F3Q08477 520 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 CCDC173Q0VFZ6 552 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 DNAJC3Q13217 504 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 ACAP1Q15027 740 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 E2F5Q15329 346 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 TAF5Q15542 800 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 CST6Q15828 149 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 DCAF6Q58WW2 860 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 NUGGCQ68CJ6 796 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 ZNF776Q68DI1 518 aaPredicted RBP5.99□□□□□ -1.45
USP3-215ENST00000559771 ISM2Q6H9L7 571 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 NCEH1Q6PIU2 408 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 DHRS13Q6UX07 377 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 BEND5Q7L4P6 421 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 TAC4Q86UU9 113 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 SPATS2Q86XZ4 545 aaKnown RBP5.99□□□□□ -1.45
USP3-215ENST00000559771 GATAD2AQ86YP4 633 aa5.99□□□□□ -1.45
USP3-215ENST00000559771 MMAAQ8IVH4 418 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms