RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 CACNG3O60359 315 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 SRFP11831 508 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 RBL1P28749 1068 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 PMS2P54278 862 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 CXorf57Q6NSI4 855 aaKnown RBP16.91■□□□□ 0.3
TPM1-219ENST00000559397 LRIG3Q6UXM1 1119 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 PCGF5Q86SE9 256 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 C12orf40Q86WS4 652 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 ETFBKMTQ8IXQ9 262 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 CARNMT1Q8N4J0 409 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 ZCCHC9Q8N567 271 aaKnown RBP16.91■□□□□ 0.3
TPM1-219ENST00000559397 FIBINQ8TAL6 211 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 CSGALNACT1Q8TDX6 532 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 LMLNQ96KR4 655 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 PABPC3Q9H361 631 aaKnown RBP16.91■□□□□ 0.3
TPM1-219ENST00000559397 DUSP12Q9UNI6 340 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 SHOC2Q9UQ13 582 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 TBC1D30Q9Y2I9 924 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 RAD54BQ9Y620 910 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 CHD5Q8TDI0 1954 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 MFSD11O43934 449 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 MAPKAPK2P49137 400 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 FSCBQ5H9T9 825 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 B4GALNT4Q76KP1 1039 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 RNF135Q8IUD6 432 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 RELL1Q8IUW5 271 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 MFN1Q8IWA4 741 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 NAT16Q8N8M0 369 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 OR52K2Q8NGK3 314 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 CD320Q9NPF0 282 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 SORCS3Q9UPU3 1222 aa16.91■□□□□ 0.3
TPM1-219ENST00000559397 KIAA1549LQ6ZVL6 1849 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.9■□□□□ 0.3
TPM1-219ENST00000559397 H0Y626 953 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 KCNN4O15554 427 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 MAP3K6O95382 1288 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 CISD3P0C7P0 127 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 OR1E1P30953 314 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 SLC6A11P48066 632 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 ZNF177Q13360 481 aaPredicted RBP16.9■□□□□ 0.3
TPM1-219ENST00000559397 IER5LQ5T953 404 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 AFMIDQ63HM1 303 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 ASTLQ6HA08 431 aaPredicted RBP16.9■□□□□ 0.3
TPM1-219ENST00000559397 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.9■□□□□ 0.3
TPM1-219ENST00000559397 GJD3Q8N144 294 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 NPWQ8N729 165 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 UBLCP1Q8WVY7 318 aaPredicted RBP16.9■□□□□ 0.3
TPM1-219ENST00000559397 CPT1BQ92523 772 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 XPO6Q96QU8 1125 aaKnown RBP16.9■□□□□ 0.3
TPM1-219ENST00000559397 SLC2A11Q9BYW1 496 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 NOL6Q9H6R4 1146 aaKnown RBP16.9■□□□□ 0.3
TPM1-219ENST00000559397 PAK5Q9P286 719 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 PLAAQ9Y263 795 aa16.9■□□□□ 0.3
TPM1-219ENST00000559397 MIA3Q5JRA6 1907 aa16.89■□□□□ 0.3
TPM1-219ENST00000559397 SMAPO00193 183 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 TRIM24O15164 1050 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 GCATO75600 419 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 OAS2P29728 719 aaKnown RBP16.89■□□□□ 0.29
TPM1-219ENST00000559397 HLA-FP30511 346 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 OPRD1P41143 372 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 SOX9P48436 509 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 NRLP54845 237 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 PFKPQ01813 784 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 CDH18Q13634 790 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 PDK1Q15118 436 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 PRKD1Q15139 912 aaPredicted RBP16.89■□□□□ 0.29
TPM1-219ENST00000559397 TJAP1Q5JTD0 557 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 C6orf118Q5T5N4 469 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 C4orf22Q6V702 233 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 CEP128Q6ZU80 1094 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 TRMT10CQ7L0Y3 403 aaKnown RBP16.89■□□□□ 0.29
TPM1-219ENST00000559397 SETD3Q86TU7 594 aaPredicted RBP16.89■□□□□ 0.29
TPM1-219ENST00000559397 HOOK3Q86VS8 718 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 ARHGAP12Q8IWW6 846 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 PPIL6Q8IXY8 311 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 UMODL1-AS1Q8N2C9 162 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 NAT8LQ8N9F0 302 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 PRCCQ92733 491 aaPredicted RBP16.89■□□□□ 0.29
TPM1-219ENST00000559397 SEMA4AQ9H3S1 761 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 DONSONQ9NYP3 566 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 NUP205Q92621 2012 aa16.89■□□□□ 0.29
TPM1-219ENST00000559397 C5orf60A6NFR6 353 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 OPA1O60313 960 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 TULP3O75386 442 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 ZNF189O75820 626 aaPredicted RBP16.88■□□□□ 0.29
TPM1-219ENST00000559397 NUDT17P0C025 328 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 EIF2DP41214 584 aaKnown RBP16.88■□□□□ 0.29
TPM1-219ENST00000559397 LMAN2Q12907 356 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 HSP90B2PQ58FF3 399 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 NAIF1Q69YI7 327 aaPredicted RBP16.88■□□□□ 0.29
TPM1-219ENST00000559397 KIAA0907Q7Z7F0 614 aaPredicted RBP16.88■□□□□ 0.29
TPM1-219ENST00000559397 PHTF2Q8N3S3 785 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 LZTR1Q8N653 840 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.88■□□□□ 0.29
TPM1-219ENST00000559397 ZNF557Q8N988 423 aaPredicted RBP16.88■□□□□ 0.29
TPM1-219ENST00000559397 TFB1MQ8WVM0 346 aaKnown RBP16.88■□□□□ 0.29
TPM1-219ENST00000559397 NECAB3Q96P71 396 aaPredicted RBP16.88■□□□□ 0.29
TPM1-219ENST00000559397 HEBP1Q9NRV9 189 aa16.88■□□□□ 0.29
TPM1-219ENST00000559397 DNAJC17Q9NVM6 304 aaKnown RBP16.88■□□□□ 0.29
TPM1-219ENST00000559397 OR51B4Q9Y5P0 310 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms