RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 HBS1LQ9Y450 684 aaKnown RBP13.21□□□□□ -0.29
SMAD3-207ENST00000558763 PRRC2BQ5JSZ5 2229 aaKnown RBP13.21□□□□□ -0.29
SMAD3-207ENST00000558763 C5orf42Q9H799 3197 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 GOLGA6L7A0A1B0GV03 622 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 ARHGAP42A6NI28 874 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 SDR42E2A6NKP2 422 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 ERI2A8K979 691 aaKnown RBP13.21□□□□□ -0.29
SMAD3-207ENST00000558763 TRDMT1O14717 391 aaKnown RBP13.21□□□□□ -0.29
SMAD3-207ENST00000558763 MATN3O15232 486 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 PRPF4O43172 522 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMAD3-207ENST00000558763 COCHO43405 550 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 UGT1A9O60656 530 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 FAM107AO95990 144 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 CSH1P0DML2 217 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 CSH2P0DML3 217 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 WDR4P57081 412 aaKnown RBP13.21□□□□□ -0.29
SMAD3-207ENST00000558763 SESN2P58004 480 aaPredicted RBP13.21□□□□□ -0.29
SMAD3-207ENST00000558763 SARNPP82979 210 aaKnown RBP13.21□□□□□ -0.29
SMAD3-207ENST00000558763 ITPRIPL1Q6GPH6 555 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 CYS1Q717R9 158 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 UNC5BQ8IZJ1 945 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 PDZD8Q8NEN9 1154 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 VN1R2Q8NFZ6 395 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 OR52K1Q8NGK4 314 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 PSMG2Q969U7 264 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 UGT1A7Q9HAW7 530 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 UGT1A10Q9HAW8 530 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 UGT1A8Q9HAW9 530 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 SENP1Q9P0U3 644 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 MAD1L1Q9Y6D9 718 aa13.21□□□□□ -0.29
SMAD3-207ENST00000558763 SPTBN5Q9NRC6 3674 aaKnown RBP13.21□□□□□ -0.3
SMAD3-207ENST00000558763 MIA3Q5JRA6 1907 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 BPTFQ12830 3046 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 GMNCA6NCL1 334 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 FAM155BO75949 473 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 HLA-DQB2P05538 268 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 IGFBP4P22692 258 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 SLC6A4P31645 630 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 MSH2P43246 934 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 NDST2P52849 883 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 SLC18A1P54219 525 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 HYAL1Q12794 435 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 LRRC14Q15048 493 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 QPCTQ16769 361 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 NUGGCQ68CJ6 796 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 DNAJB7Q7Z6W7 309 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-207ENST00000558763 CIR1Q86X95 450 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-207ENST00000558763 C4orf33Q8N1A6 199 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 USP33Q8TEY7 942 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 FATE1Q969F0 183 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 HMCESQ96FZ2 354 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 MLXIPLQ9NP71 852 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 IPO11Q9UI26 975 aaKnown RBP13.2□□□□□ -0.3
SMAD3-207ENST00000558763 DNMT3LQ9UJW3 386 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 HMX2A2RU54 273 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 FAM47DPA6NHR8 397 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 LINC01565O15544 149 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 OAS1P00973 400 aaKnown RBP13.2□□□□□ -0.3
SMAD3-207ENST00000558763 KLKB1P03952 638 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 KRT15P19012 456 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 DRD4P21917 467 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 ATP5C1P36542 298 aaKnown RBP13.2□□□□□ -0.3
SMAD3-207ENST00000558763 IFNAR2P48551 515 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 NIPAL4Q0D2K0 466 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 ADGRE1Q14246 886 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 CRYMQ14894 314 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 ITIH5Q86UX2 942 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 LRRC6Q86X45 466 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 LRRC49Q8IUZ0 686 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 ELMOD1Q8N336 334 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 MICALL1Q8N3F8 863 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 SPATA22Q8NHS9 363 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 ZNF473Q8WTR7 871 aaKnown RBP13.2□□□□□ -0.3
SMAD3-207ENST00000558763 WBP2Q969T9 261 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 ZNF512Q96ME7 567 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-207ENST00000558763 FCRL5Q96RD9 977 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 CDK5RAP1Q96SZ6 601 aaKnown RBP13.2□□□□□ -0.3
SMAD3-207ENST00000558763 SSU72Q9NP77 194 aaKnown RBP13.2□□□□□ -0.3
SMAD3-207ENST00000558763 ZNF180Q9UJW8 692 aa13.2□□□□□ -0.3
SMAD3-207ENST00000558763 DOCK6Q96HP0 2047 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 NDUFAB1O14561 156 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 SPAG7O75391 227 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 ASMTLO95671 621 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 PGAM1P18669 254 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 TACR2P21452 398 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 KPNA1P52294 538 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-207ENST00000558763 HNRNPH2P55795 449 aaKnown RBP13.19□□□□□ -0.3
SMAD3-207ENST00000558763 HECTD3Q5T447 861 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 SLC26A11Q86WA9 606 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 CHSY1Q86X52 802 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 HS6ST3Q8IZP7 471 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 C12orf76Q8N812 135 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-207ENST00000558763 PPM1NQ8N819 430 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 ANKRD42Q8N9B4 389 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 MGARPQ8TDB4 240 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 SERAC1Q96JX3 654 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 ZFRQ96KR1 1074 aaKnown RBP13.19□□□□□ -0.3
SMAD3-207ENST00000558763 CDCA3Q99618 268 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-207ENST00000558763 CORO1BQ9BR76 489 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 RNF38Q9H0F5 515 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms