RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 FRS2Q8WU20 508 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 NELL1Q92832 810 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 RNF157Q96PX1 679 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 BCCIPQ9P287 314 aaKnown RBP eCLIP26.09■■□□□ 1.77
SMAD6-202ENST00000557916 PCDHA3Q9Y5H8 950 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 CHD5Q8TDI0 1954 aa26.09■■□□□ 1.77
SMAD6-202ENST00000557916 TARSL2A2RTX5 802 aaKnown RBP26.08■■□□□ 1.77
SMAD6-202ENST00000557916 SMAD6O43541 496 aaKnown RBP26.08■■□□□ 1.77
SMAD6-202ENST00000557916 SIN3BO75182 1162 aa26.08■■□□□ 1.77
SMAD6-202ENST00000557916 ZRANB2O95218 330 aaKnown RBP eCLIP26.08■■□□□ 1.77
SMAD6-202ENST00000557916 GABRG2P18507 467 aa26.08■■□□□ 1.77
SMAD6-202ENST00000557916 SERPINH1P50454 418 aaKnown RBP26.08■■□□□ 1.77
SMAD6-202ENST00000557916 CLCN6P51797 869 aa26.08■■□□□ 1.77
SMAD6-202ENST00000557916 GEMIN4P57678 1058 aaKnown RBP26.08■■□□□ 1.77
SMAD6-202ENST00000557916 MFSD7Q6UXD7 560 aa26.08■■□□□ 1.77
SMAD6-202ENST00000557916 LEKR1Q6ZMV7 388 aa26.08■■□□□ 1.77
SMAD6-202ENST00000557916 PQLC3Q8N755 202 aa26.08■■□□□ 1.77
SMAD6-202ENST00000557916 PTPRN2Q92932 1015 aa26.08■■□□□ 1.77
SMAD6-202ENST00000557916 MAK16Q9BXY0 300 aaKnown RBP26.08■■□□□ 1.77
SMAD6-202ENST00000557916 CCDC163A0A0D9SF12 145 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 CCDC66A2RUB6 948 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 ZSCAN5CA6NGD5 496 aaPredicted RBP26.07■■□□□ 1.76
SMAD6-202ENST00000557916 AXIN1O15169 862 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 FTCDO95954 541 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 CTNNA2P26232 953 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 C9orf64Q5T6V5 341 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 NCBP2-AS2Q69YL0 99 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 LONP2Q86WA8 852 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 TP53INP2Q8IXH6 220 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 RCOR2Q8IZ40 523 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 OR2T3Q8NH03 318 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 MKRN2Q9H000 416 aaKnown RBP26.07■■□□□ 1.76
SMAD6-202ENST00000557916 IRF2BPLQ9H1B7 796 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 ZSCAN32Q9NX65 697 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 ACTL7AQ9Y615 435 aa26.07■■□□□ 1.76
SMAD6-202ENST00000557916 CD160O95971 181 aa26.06■■□□□ 1.76
SMAD6-202ENST00000557916 VAV1P15498 845 aa26.06■■□□□ 1.76
SMAD6-202ENST00000557916 NDUFV2P19404 249 aa26.06■■□□□ 1.76
SMAD6-202ENST00000557916 COPAP53621 1224 aa26.06■■□□□ 1.76
SMAD6-202ENST00000557916 PAFAH1B3Q15102 231 aaKnown RBP26.06■■□□□ 1.76
SMAD6-202ENST00000557916 WDR5BQ86VZ2 330 aa26.06■■□□□ 1.76
SMAD6-202ENST00000557916 EXD1Q8NHP7 514 aa26.06■■□□□ 1.76
SMAD6-202ENST00000557916 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.06■■□□□ 1.76
SMAD6-202ENST00000557916 RBM41Q96IZ5 413 aaKnown RBP26.06■■□□□ 1.76
SMAD6-202ENST00000557916 TPSD1Q9BZJ3 242 aa26.06■■□□□ 1.76
SMAD6-202ENST00000557916 FBRSQ9HAH7 460 aa26.06■■□□□ 1.76
SMAD6-202ENST00000557916 CDKN2BP42772 138 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 SPOCD1Q6ZMY3 1216 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 Q6ZVU0 165 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 TMPRSS6Q8IU80 811 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 CCDC50Q8IVM0 306 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 MRGPRX1Q96LB2 322 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 SLC6A17Q9H1V8 727 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 CKAP5Q14008 2032 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 NUP205Q92621 2012 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 MIF4GDA9UHW6 222 aaKnown RBP26.05■■□□□ 1.76
SMAD6-202ENST00000557916 J3KR12 359 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 MFSD11O43934 449 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 PRAMEF11O60813 436 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 PEX5P50542 639 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 RWDD2BP57060 319 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 C22orf39Q6P5X5 142 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 ARHGAP36Q6ZRI8 547 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 RFX6Q8HWS3 928 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 UBL4BQ8N7F7 174 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 ZBTB44Q8NCP5 570 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 ATOH1Q92858 354 aaPredicted RBP26.05■■□□□ 1.76
SMAD6-202ENST00000557916 CEP44Q9C0F1 390 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 PRDM16Q9HAZ2 1276 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 SP110Q9HB58 689 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 IPO11Q9UI26 975 aaKnown RBP26.05■■□□□ 1.76
SMAD6-202ENST00000557916 PACSIN2Q9UNF0 486 aaPredicted RBP26.05■■□□□ 1.76
SMAD6-202ENST00000557916 FCF1Q9Y324 198 aaKnown RBP26.05■■□□□ 1.76
SMAD6-202ENST00000557916 PCDHGA2Q9Y5H1 932 aa26.05■■□□□ 1.76
SMAD6-202ENST00000557916 MUC6Q6W4X9 2439 aa26.04■■□□□ 1.76
SMAD6-202ENST00000557916 ZSCAN12O43309 604 aa26.04■■□□□ 1.76
SMAD6-202ENST00000557916 BNIP3LO60238 219 aa26.04■■□□□ 1.76
SMAD6-202ENST00000557916 TAZQ16635 292 aa26.04■■□□□ 1.76
SMAD6-202ENST00000557916 INO80DQ53TQ3 878 aaPredicted RBP26.04■■□□□ 1.76
SMAD6-202ENST00000557916 SLC9A4Q6AI14 798 aa26.04■■□□□ 1.76
SMAD6-202ENST00000557916 KIAA1324Q6UXG2 1013 aaKnown RBP26.04■■□□□ 1.76
SMAD6-202ENST00000557916 STK40Q8N2I9 435 aa26.04■■□□□ 1.76
SMAD6-202ENST00000557916 CASKIN2Q8WXE0 1202 aa26.04■■□□□ 1.76
SMAD6-202ENST00000557916 PRCCQ92733 491 aaPredicted RBP26.04■■□□□ 1.76
SMAD6-202ENST00000557916 SIPA1Q96FS4 1042 aa26.04■■□□□ 1.76
SMAD6-202ENST00000557916 ALS2CR12Q96Q35 445 aa26.04■■□□□ 1.76
SMAD6-202ENST00000557916 TNKS2Q9H2K2 1166 aa26.04■■□□□ 1.76
SMAD6-202ENST00000557916 PDFQ9HBH1 243 aa26.04■■□□□ 1.76
SMAD6-202ENST00000557916 UBA2Q9UBT2 640 aaPredicted RBP26.04■■□□□ 1.76
SMAD6-202ENST00000557916 RAPGEFL1Q9UHV5 662 aa26.04■■□□□ 1.76
SMAD6-202ENST00000557916 CACNA1HO95180 2353 aa26.03■■□□□ 1.76
SMAD6-202ENST00000557916 APOL1O14791 398 aa26.03■■□□□ 1.76
SMAD6-202ENST00000557916 RNASEH1O60930 286 aaKnown RBP26.03■■□□□ 1.76
SMAD6-202ENST00000557916 ZNF821O75541 412 aaPredicted RBP26.03■■□□□ 1.76
SMAD6-202ENST00000557916 KRT10P13645 584 aa26.03■■□□□ 1.76
SMAD6-202ENST00000557916 ZFXP17010 805 aaPredicted RBP26.03■■□□□ 1.76
SMAD6-202ENST00000557916 IL10RBQ08334 325 aa26.03■■□□□ 1.76
SMAD6-202ENST00000557916 ELAVL3Q14576 367 aaKnown RBP26.03■■□□□ 1.76
SMAD6-202ENST00000557916 LLGL1Q15334 1064 aa26.03■■□□□ 1.76
SMAD6-202ENST00000557916 TFDP3Q5H9I0 405 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms