RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ARL14EPQ8N8R7 260 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 BOLLQ8N9W6 283 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TEX45Q8NA69 505 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 KDM1BQ8NB78 822 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 LINS1Q8NG48 757 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 OR4N2Q8NGD1 307 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 C16orf52Q8NHV5 167 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 NSUN4Q96CB9 384 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 RNFT2Q96EX2 444 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 FCRL5Q96RD9 977 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 SIGLEC11Q96RL6 698 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ABHD14AQ9BUJ0 271 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TM2D2Q9BX73 214 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ZHX3Q9H4I2 956 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 MOV10Q9HCE1 1003 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 NSMCE4AQ9NXX6 385 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 NCKIPSDQ9NZQ3 722 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 KLQ9UEF7 1012 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 SWAP70Q9UH65 585 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ICKQ9UPZ9 632 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 SLC45A1Q9Y2W3 748 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 PCDHB2Q9Y5E7 798 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 SCINQ9Y6U3 715 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 SCRIBQ14160 1630 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CFAP65Q6ZU64 1925 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TRBV5-3A0A0A0MS03 114 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 RNMTO43148 476 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TNFSF14O43557 240 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ATG13O75143 517 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 DAB1O75553 588 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 WDHD1O75717 1129 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TOP3BO95985 862 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 AGR2O95994 175 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CD4P01730 458 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 KLKB1P03952 638 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CHMP24386 653 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TM4SF1P30408 202 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ADORA2A-AS1P86434 159 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 BYSLQ13895 437 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 SLC18A3Q16572 532 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TXNDC8Q6A555 127 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ANKRD40Q6AI12 368 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 P3H2Q8IVL5 708 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 FAM185AQ8N0U4 392 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 KAT2AQ92830 837 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 MSI2Q96DH6 328 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ZBTB10Q96DT7 871 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ELP4Q96EB1 424 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 FAM118BQ9BPY3 351 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TRMOQ9BU70 441 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 SLC26A6Q9BXS9 759 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CADM1Q9BY67 442 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 LTB4R2Q9NPC1 389 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ATP8A2Q9NTI2 1148 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CCNL1Q9UK58 526 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 BTBD3Q9Y2F9 522 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 SLC4A4Q9Y6R1 1079 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ZMYM2Q9UBW7 1377 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 OR6C68A6NDL8 312 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 SEC14L2O76054 403 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 SERPINC1P01008 464 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 NHLRC4P0CG21 123 aaPredicted RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 HOXA13P31271 388 aaPredicted RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 GPR12P47775 334 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 TDO2P48775 406 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 CASP6P55212 293 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 IRX3P78415 501 aaPredicted RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 ZBTB16Q05516 673 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 DLGAP5Q15398 846 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 CCNG2Q16589 344 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 SYCE2Q6PIF2 218 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 PRSS45Q7RTY3 260 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 GPR150Q8NGU9 434 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 TDRD7Q8NHU6 1098 aaKnown RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 C2CD4CQ8TF44 421 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 APOPT1Q96IL0 206 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 FRMD8Q9BZ67 464 aaPredicted RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 PRSS22Q9GZN4 317 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 R3HDMLQ9H3Y0 253 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 TASP1Q9H6P5 420 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 KIAA1456Q9P272 454 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 UPB1Q9UBR1 384 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 A0A1W2PPH5 198 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 TSPAN4O14817 238 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 AKAP8O43823 692 aaKnown RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 TLR2O60603 784 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 CSPG5O95196 566 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 HNRNPA1P09651 372 aaKnown RBP eCLIP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 GNLYP22749 145 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 TBXAS1P24557 533 aaPredicted RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 RYKP34925 604 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 CPOXP36551 454 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 NAP1L1P55209 391 aaKnown RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 RPL7AP62424 266 aaKnown RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 ST3GAL1Q11201 340 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 PGM5Q15124 567 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 ATG9BQ674R7 924 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 SARM1Q6SZW1 724 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms