RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TMCC1O94876 653 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 ZBTB11O95625 1053 aaPredicted RBP4.53□□□□□ -1.68
VRK1-207ENST00000557352 IGKV3-20P01619 116 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 MYZAPP0CAP1 466 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 SEC61A1P61619 476 aaKnown RBP4.53□□□□□ -1.68
VRK1-207ENST00000557352 ZNF284Q2VY69 593 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 ZACNQ401N2 412 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 C9orf57Q5W0N0 161 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 NFRKBQ6P4R8 1299 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.53□□□□□ -1.68
VRK1-207ENST00000557352 RNF144BQ7Z419 303 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 VPS52Q8N1B4 723 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 SLC2A12Q8TD20 617 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 WFIKKN2Q8TEU8 576 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 EID2BQ96D98 161 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 TRIM31Q9BZY9 425 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 SEPSECSQ9HD40 501 aaKnown RBP4.53□□□□□ -1.68
VRK1-207ENST00000557352 DAPP1Q9UN19 280 aa4.53□□□□□ -1.68
VRK1-207ENST00000557352 SCN5AQ14524 2016 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 A0A087WYN8 130 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 NPIPB13A6NJU9 1138 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 NPIPB5A8MRT5 1133 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 SMTNL1A8MU46 457 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 NPIPB4C9JG80 1138 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 MYL1P05976 194 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 ZNF12P17014 697 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 PRKCHP24723 683 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 GSTM2P28161 218 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 THPOP40225 353 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 CLCN5P51795 746 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 ERVFC1-1P60608 527 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 TRAF2Q12933 501 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 COASYQ13057 564 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 ALKBH1Q13686 389 aaKnown RBP4.52□□□□□ -1.69
VRK1-207ENST00000557352 GGT6Q6P531 493 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 SPSB3Q6PJ21 355 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 CREB3L2Q70SY1 520 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 ZBTB8BQ8NAP8 495 aaPredicted RBP4.52□□□□□ -1.69
VRK1-207ENST00000557352 OR14A16Q8NHC5 309 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 C2CD4CQ8TF44 421 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 SLC35F5Q8WV83 523 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 CCDC136Q96JN2 1154 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 KATNAL1Q9BW62 490 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 BRD8Q9H0E9 1235 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 ARFGAP3Q9NP61 516 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 IL36RNQ9UBH0 155 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 CDH22Q9UJ99 828 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 ICAM5Q9UMF0 924 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 RCE1Q9Y256 329 aa4.52□□□□□ -1.69
VRK1-207ENST00000557352 HSPB6O14558 160 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 ASAP2O43150 1006 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 ZNF432O94892 652 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 CAMTA2O94983 1202 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 SOX30O94993 753 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 FCGR2AP12318 317 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 ITGB8P26012 769 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 NUDT6P53370 316 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 TRAF3Q13114 568 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 PLCB4Q15147 1175 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 GALNTL6Q49A17 601 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 SYTL3Q4VX76 610 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 TTC22Q5TAA0 569 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 RAB11FIP2Q7L804 512 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 FJX1Q86VR8 437 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 SLC44A2Q8IWA5 706 aaPredicted RBP4.51□□□□□ -1.69
VRK1-207ENST00000557352 ZNF527Q8NB42 609 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 SCAMP5Q8TAC9 235 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 FAR1Q8WVX9 515 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 NR4A3Q92570 626 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 KCNJ9Q92806 393 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 ARRDC3Q96B67 414 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 RTP4Q96DX8 246 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 FRG2BQ96QU4 278 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 PIGSQ96S52 555 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.51□□□□□ -1.69
VRK1-207ENST00000557352 NLRC4Q9NPP4 1024 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 HERC5Q9UII4 1024 aaKnown RBP4.51□□□□□ -1.69
VRK1-207ENST00000557352 MST1RQ04912 1400 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 DOCK7Q96N67 2140 aa4.51□□□□□ -1.69
VRK1-207ENST00000557352 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.5□□□□□ -1.69
VRK1-207ENST00000557352 TMEM247A6NEH6 219 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 LDB3O75112 727 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 ACTL6BO94805 426 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 ITGA2BP08514 1039 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 CYP21A2P08686 494 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 LYL1P12980 280 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 ENO3P13929 434 aaPredicted RBP4.5□□□□□ -1.69
VRK1-207ENST00000557352 NAGAP17050 411 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 AMTP48728 403 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 PNLIPRP1P54315 467 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 CDH12P55289 794 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 EEF1A2Q05639 463 aaKnown RBP4.5□□□□□ -1.69
VRK1-207ENST00000557352 DCTN1Q14203 1278 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 RPS6KA2Q15349 733 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 PFKFB4Q16877 469 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 GXYLT1Q4G148 440 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 GFI1BQ5VTD9 330 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 XRRA1Q6P2D8 792 aa4.5□□□□□ -1.69
VRK1-207ENST00000557352 SCN4BQ8IWT1 228 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms