RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 SH2D3CQ8N5H7 860 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 MAPK15Q8TD08 544 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 TTC9Q92623 222 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 ARRDC3Q96B67 414 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 VCPIP1Q96JH7 1222 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 MED15Q96RN5 788 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 THAP9Q9H5L6 903 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 FAM204AQ9H8W3 233 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 DDIT4Q9NX09 232 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 DNAJC28Q9NX36 388 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
SNX6-209ENST00000557265 OR51B4Q9Y5P0 310 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 MYO18BQ8IUG5 2567 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 SPTA1P02549 2419 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 A0A1W2PNU3 283 aaPredicted RBP12.61□□□□□ -0.39
SNX6-209ENST00000557265 PCDH8O95206 1070 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 KRT5P13647 590 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 RBMS1P29558 406 aaKnown RBP12.61□□□□□ -0.39
SNX6-209ENST00000557265 CHRNA3P32297 505 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 GCNT1Q02742 428 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 CCDC15Q0P6D6 951 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 CETN1Q12798 172 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 ISXQ2M1V0 245 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 SEL1L3Q68CR1 1132 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 GCNT7Q6ZNI0 430 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 ATP11CQ8NB49 1132 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 OR2A12Q8NGT7 310 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 IFI44Q8TCB0 444 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 SNRNP27Q8WVK2 155 aaKnown RBP12.61□□□□□ -0.39
SNX6-209ENST00000557265 IFT43Q96FT9 208 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 KREMEN1Q96MU8 473 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 GSDMAQ96QA5 445 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNX6-209ENST00000557265 DUSP23Q9BVJ7 150 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 MUC3BQ9H195 1237 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 CLMPQ9H6B4 373 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 USP29Q9HBJ7 922 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 DYRK4Q9NR20 520 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 EVA1BQ9NVM1 165 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 VANGL2Q9ULK5 521 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 ZFR2Q9UPR6 939 aaKnown RBP12.61□□□□□ -0.39
SNX6-209ENST00000557265 SATB2Q9UPW6 733 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 ZDHHC9Q9Y397 364 aa12.61□□□□□ -0.39
SNX6-209ENST00000557265 ATMQ13315 3056 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 MYLKQ15746 1914 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 CPED1A4D0V7 1026 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 K7ERQ8 282 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 RNF103O00237 685 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 P4HA2O15460 535 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 CLDN11O75508 207 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 LETM1O95202 739 aaPredicted RBP12.6□□□□□ -0.39
SNX6-209ENST00000557265 SRCP12931 536 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 KRT10P13645 584 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 TGM2P21980 687 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 GGCXP38435 758 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 HNRNPKP61978 463 aaKnown RBP eCLIP12.6□□□□□ -0.394e-8■□□□□ 11.2
SNX6-209ENST00000557265 KCNC4Q03721 635 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 CCDC40Q4G0X9 1142 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 C3orf38Q5JPI3 329 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 OR6B2Q6IFH4 312 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 PTAR1Q7Z6K3 402 aaPredicted RBP12.6□□□□□ -0.39
SNX6-209ENST00000557265 ABI3BPQ7Z7G0 1075 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 C14orf80Q86SX3 495 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 DEFB106AQ8N104 65 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 CHST14Q8NCH0 376 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 EHBP1Q8NDI1 1231 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 TMIEQ8NEW7 156 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 MED8Q96G25 268 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 ATXN7L3BQ96GX2 97 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 CCDC114Q96M63 670 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 SLC46A1Q96NT5 459 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 SCAND2PQ9GZW5 306 aaPredicted RBP12.6□□□□□ -0.39
SNX6-209ENST00000557265 CNTN6Q9UQ52 1028 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 HS3ST2Q9Y278 367 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 TBC1D30Q9Y2I9 924 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 HS3ST4Q9Y661 456 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 COL6A6A6NMZ7 2263 aa12.6□□□□□ -0.39
SNX6-209ENST00000557265 A6NNZ2 444 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 K7ENP7 123 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 MED7O43513 233 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 SMAD6O43541 496 aaKnown RBP12.59□□□□□ -0.39
SNX6-209ENST00000557265 SNAP91O60641 907 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 PRNPP04156 253 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 CENPBP07199 599 aaPredicted RBP12.59□□□□□ -0.39
SNX6-209ENST00000557265 RRM1P23921 792 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 KRT83P78385 493 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 NME3Q13232 169 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 PDCLQ13371 301 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 FZD2Q14332 565 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 MEA1Q16626 185 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 CDKN3Q16667 212 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 TMEM259Q4ZIN3 620 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 ARSIQ5FYB1 569 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 KIAA1614Q5VZ46 1190 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 INO80CQ6PI98 192 aaPredicted RBP12.59□□□□□ -0.39
SNX6-209ENST00000557265 IGF2-ASQ6U949 168 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 ERN2Q76MJ5 926 aaKnown RBP12.59□□□□□ -0.39
SNX6-209ENST00000557265 DCP2Q8IU60 420 aaKnown RBP12.59□□□□□ -0.39
SNX6-209ENST00000557265 ZNF548Q8NEK5 533 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms