RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 CCDC117Q8IWD4 279 aaPredicted RBP12.87□□□□□ -0.35
PSEN1-220ENST00000557037 IL22RA1Q8N6P7 574 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 EFCAB3Q8N7B9 438 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 TEX19Q8NA77 164 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 GALNT11Q8NCW6 608 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 FRS2Q8WU20 508 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 NKD1Q969G9 470 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 ULBP1Q9BZM6 244 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 GPR27Q9NS67 375 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 OLA1Q9NTK5 396 aaKnown RBP12.87□□□□□ -0.35
PSEN1-220ENST00000557037 CUEDC1Q9NWM3 386 aaPredicted RBP12.87□□□□□ -0.35
PSEN1-220ENST00000557037 SPASTQ9UBP0 616 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 PPM1HQ9ULR3 514 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 ZNF891A8MT65 544 aaPredicted RBP12.86□□□□□ -0.35
PSEN1-220ENST00000557037 K7EM74 188 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 RAD51BO15315 384 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 YY2O15391 372 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 DUX1O43812 170 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 ACSL4O60488 711 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 DDAH2O95865 285 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 ZBED1O96006 694 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 LONP1P36776 959 aaKnown RBP12.86□□□□□ -0.35
PSEN1-220ENST00000557037 NNMTP40261 264 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 SLC11A2P49281 568 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 ANAPC15P60006 121 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 FGL2Q14314 439 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 TCEA2Q15560 299 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 DEFB109BQ30KR1 87 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 ESRP1Q6NXG1 681 aaKnown RBP12.86□□□□□ -0.35
PSEN1-220ENST00000557037 BHLHA9Q7RTU4 235 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 PIGZQ86VD9 579 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 Q8N9G6 341 aaPredicted RBP12.86□□□□□ -0.35
PSEN1-220ENST00000557037 KYQ8NBH2 561 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 XXYLT1Q8NBI6 393 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 MOCOSQ96EN8 888 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 CATSPER2Q96P56 530 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 NT5C1AQ9BXI3 368 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 LRRN3Q9H3W5 708 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 AGPAT3Q9NRZ7 376 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 HS3ST3A1Q9Y663 406 aa12.86□□□□□ -0.35
PSEN1-220ENST00000557037 MED13LQ71F56 2210 aa12.85□□□□□ -0.35
PSEN1-220ENST00000557037 FRMD3A2A2Y4 597 aa12.85□□□□□ -0.35
PSEN1-220ENST00000557037 TYW5A2RUC4 315 aaKnown RBP12.85□□□□□ -0.35
PSEN1-220ENST00000557037 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.85□□□□□ -0.35
PSEN1-220ENST00000557037 LMO7DNF2Z398 122 aa12.85□□□□□ -0.35
PSEN1-220ENST00000557037 STMND1H3BQB6 276 aa12.85□□□□□ -0.35
PSEN1-220ENST00000557037 IRAK2O43187 625 aa12.85□□□□□ -0.35
PSEN1-220ENST00000557037 CNTN5O94779 1100 aa12.85□□□□□ -0.35
PSEN1-220ENST00000557037 LUC7L3O95232 432 aaKnown RBP12.85□□□□□ -0.35
PSEN1-220ENST00000557037 C4BPAP04003 597 aaKnown RBP12.85□□□□□ -0.35
PSEN1-220ENST00000557037 CD58P19256 250 aa12.85□□□□□ -0.35
PSEN1-220ENST00000557037 SGSM1Q2NKQ1 1148 aa12.85□□□□□ -0.35
PSEN1-220ENST00000557037 NEK5Q6P3R8 708 aa12.85□□□□□ -0.35
PSEN1-220ENST00000557037 KYAT3Q6YP21 454 aaKnown RBP12.85□□□□□ -0.35
PSEN1-220ENST00000557037 LRRC61Q9BV99 259 aa12.85□□□□□ -0.35
PSEN1-220ENST00000557037 PRDM8Q9NQV8 689 aa12.85□□□□□ -0.35
PSEN1-220ENST00000557037 STK17AQ9UEE5 414 aa12.85□□□□□ -0.35
PSEN1-220ENST00000557037 APOBEC3BQ9UH17 382 aaKnown RBP12.85□□□□□ -0.35
PSEN1-220ENST00000557037 LIMCH1Q9UPQ0 1083 aa12.85□□□□□ -0.35
PSEN1-220ENST00000557037 SVILO95425 2214 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 TTLL8A6PVC2 850 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 LRRIQ3A6PVS8 624 aaPredicted RBP12.84□□□□□ -0.35
PSEN1-220ENST00000557037 EFCAB7A8K855 629 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 KPNA3O00505 521 aaPredicted RBP12.84□□□□□ -0.35
PSEN1-220ENST00000557037 TGFB1I1O43294 461 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 PAK4O96013 591 aaPredicted RBP12.84□□□□□ -0.35
PSEN1-220ENST00000557037 CELA2BP08218 269 aaPredicted RBP12.84□□□□□ -0.35
PSEN1-220ENST00000557037 CCL4P13236 92 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 GJB2P29033 226 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 RABIFP47224 123 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 INCA1Q0VD86 236 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 DCAF6Q58WW2 860 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 RAB41Q5JT25 222 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 PHF19Q5T6S3 580 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 TMEM164Q5U3C3 297 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 RRAGBQ5VZM2 374 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 BSPRYQ5W0U4 402 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 Q6ZVU0 165 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 STXBP4Q6ZWJ1 553 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.84□□□□□ -0.35
PSEN1-220ENST00000557037 PMEPA1Q969W9 287 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 CMKLR1Q99788 373 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 CLPBQ9H078 707 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 NUCKS1Q9H1E3 243 aaKnown RBP12.84□□□□□ -0.35
PSEN1-220ENST00000557037 SHANK1Q9Y566 2161 aa12.84□□□□□ -0.35
PSEN1-220ENST00000557037 YJEFN3A6XGL0 299 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 E7ENQ6 273 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 TULP2O00295 520 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 PDGFRAP16234 1089 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 TSHRP16473 764 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 ZFP36L1Q07352 338 aaKnown RBP12.83□□□□□ -0.36
PSEN1-220ENST00000557037 C16orf72Q14CZ0 275 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 EIF2S3LQ2VIR3 472 aaKnown RBP12.83□□□□□ -0.36
PSEN1-220ENST00000557037 TMEM259Q4ZIN3 620 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 ZNF394Q53GI3 561 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 PM20D1Q6GTS8 502 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 UNC45BQ8IWX7 931 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 NELFCDQ8IXH7 590 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 PHACTR4Q8IZ21 702 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms