RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 FANCIQ9NVI1 1328 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 TCRBV5S1A1TA0A578 114 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 DHHO43323 396 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 ASNA1O43681 348 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 ITGB6P18564 788 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 UBXN2AP68543 259 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 PPATQ06203 517 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 GALNT1Q10472 559 aaPredicted RBP5.74□□□□□ -1.49
HIF1A-209ENST00000556827 GRM4Q14833 912 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 PUM3Q15397 648 aaKnown RBP5.74□□□□□ -1.49
HIF1A-209ENST00000556827 ELF2Q15723 593 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 PFKFB4Q16877 469 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 TUBB8Q3ZCM7 444 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 FKBP1CQ5VVH2 108 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 PGBD2Q6P3X8 592 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 SLC2A7Q6PXP3 512 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 SERPINA13PQ6UXR4 307 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 CHSY1Q86X52 802 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 ATG16L2Q8NAA4 619 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 MAFAQ8NHW3 353 aaPredicted RBP5.74□□□□□ -1.49
HIF1A-209ENST00000556827 EDC3Q96F86 508 aaKnown RBP5.74□□□□□ -1.49
HIF1A-209ENST00000556827 FAM84BQ96KN1 310 aaPredicted RBP5.74□□□□□ -1.49
HIF1A-209ENST00000556827 FCRL4Q96PJ5 515 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 HTATIP2Q9BUP3 242 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 BTBD3Q9Y2F9 522 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 PCDHAC2Q9Y5I4 1007 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 COL4A1P02462 1669 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 ZNF521Q96K83 1311 aa5.74□□□□□ -1.49
HIF1A-209ENST00000556827 GOLGA6L3A6NEY3 463 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 NPC1O15118 1278 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 ANP32CO43423 234 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 BMP15O95972 392 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 MBPP02686 304 aaPredicted RBP5.73□□□□□ -1.49
HIF1A-209ENST00000556827 ALADP13716 330 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 ARHGAP25P42331 645 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 PSMC4P43686 418 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 GPC5P78333 572 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 PPIL2Q13356 520 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 KCNJ12Q14500 433 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 SPARCL1Q14515 664 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 CERKLQ49MI3 558 aaPredicted RBP5.73□□□□□ -1.49
HIF1A-209ENST00000556827 ARL6IP4Q66PJ3 421 aaKnown RBP5.73□□□□□ -1.49
HIF1A-209ENST00000556827 CCDC174Q6PII3 467 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 PIK3AP1Q6ZUJ8 805 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 MYLK4Q86YV6 388 aaPredicted RBP5.73□□□□□ -1.49
HIF1A-209ENST00000556827 PNPLA1Q8N8W4 532 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 OR1N1Q8NGS0 311 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 ZKSCAN4Q969J2 545 aaPredicted RBP5.73□□□□□ -1.49
HIF1A-209ENST00000556827 MCRS1Q96EZ8 462 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 RITA1Q96K30 269 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 C5orf34Q96MH7 638 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 PARK7Q99497 189 aaKnown RBP5.73□□□□□ -1.49
HIF1A-209ENST00000556827 COMMD10Q9Y6G5 202 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 TAF1P21675 1872 aa5.73□□□□□ -1.49
HIF1A-209ENST00000556827 AKAP11Q9UKA4 1901 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 PNMA6EA0A0J9YXQ4 647 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.72□□□□□ -1.49
HIF1A-209ENST00000556827 KCNU1A8MYU2 1149 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 BTBD19C9JJ37 291 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 H0YGN5 161 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 H7C1Q1 480 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 M0QZQ0 153 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 PDHXO00330 501 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 DNPH1O43598 174 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 MT-CO3P00414 261 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 ANXA6P08133 673 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 TMIGD3P0DMS9 266 aaPredicted RBP5.72□□□□□ -1.49
HIF1A-209ENST00000556827 NPPBP16860 134 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 ATF7P17544 494 aaPredicted RBP5.72□□□□□ -1.49
HIF1A-209ENST00000556827 CAPN2P17655 700 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 GALNSP34059 522 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 MMP13P45452 471 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 TRAPPC10P48553 1259 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 TXNL4AP83876 142 aaKnown RBP5.72□□□□□ -1.49
HIF1A-209ENST00000556827 DNASE1L3Q13609 305 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 FAM90A2PQ658T7 463 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 DENND2CQ68D51 928 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 C11orf87Q6NUJ2 197 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 FASTKD5Q7L8L6 764 aaKnown RBP5.72□□□□□ -1.49
HIF1A-209ENST00000556827 ANKRD23Q86SG2 305 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 LINC01465Q8N7H1 131 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 C12orf76Q8N812 135 aaPredicted RBP5.72□□□□□ -1.49
HIF1A-209ENST00000556827 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.72□□□□□ -1.49
HIF1A-209ENST00000556827 Q8N9P0 234 aaPredicted RBP5.72□□□□□ -1.49
HIF1A-209ENST00000556827 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.72□□□□□ -1.49
HIF1A-209ENST00000556827 FAM71DQ8N9W8 422 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 FAM151AQ8WW52 585 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 KAZALD1Q96I82 304 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 PUS3Q9BZE2 481 aaKnown RBP5.72□□□□□ -1.49
HIF1A-209ENST00000556827 PTPRHQ9HD43 1115 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 RIPOR2Q9Y4F9 1068 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 PCDHB7Q9Y5E2 793 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 SSC5DA1L4H1 1573 aa5.72□□□□□ -1.49
HIF1A-209ENST00000556827 SCN9AQ15858 1988 aa5.71□□□□□ -1.49
HIF1A-209ENST00000556827 SMIM35A0A1B0GVV1 85 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 TRIM38O00635 465 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 CXCL11O14625 94 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 GCATO75600 419 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 TFRCP02786 760 aaKnown RBP5.71□□□□□ -1.5
HIF1A-209ENST00000556827 AKT1P31749 480 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms