RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 USP30Q70CQ3 517 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 RABEPKQ7Z6M1 372 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 STK40Q8N2I9 435 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 DEFB119Q8N690 84 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 CADM4Q8NFZ8 388 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 OR7D4Q8NG98 312 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 TCEAL3Q969E4 200 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 GPR174Q9BXC1 333 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 TRIM7Q9C029 511 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 DLL3Q9NYJ7 618 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 PILRBQ9UKJ0 227 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 CXorf51AA0A1B0GTR3 108 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 LNP1A1A4G5 178 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 MEI4A8MW99 385 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 PATE3B3GLJ2 98 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 EIF3CLB5ME19 914 aaKnown RBP11.8□□□□□ -0.52
SLIRP-205ENST00000556310 KHNYNO15037 678 aaKnown RBP11.8□□□□□ -0.52
SLIRP-205ENST00000556310 ALOX15BO15296 676 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 MID1O15344 667 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 GDF9O60383 454 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 MFAP3LO75121 409 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 ZMPSTE24O75844 475 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 RNF8O76064 485 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 EPHB2P29323 1055 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 HTR7P34969 479 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 PSMD8P48556 350 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 LIMK1P53667 647 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 PUM1Q14671 1186 aaKnown RBP eCLIP11.8□□□□□ -0.525e-7■■■□□ 19
SLIRP-205ENST00000556310 DLG2Q15700 870 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 ACCSLQ4AC99 568 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 TRIM61Q5EBN2 209 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 WDR45BQ5MNZ6 344 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 SYCP2LQ5T4T6 812 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 RETSATQ6NUM9 610 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 C22orf39Q6P5X5 142 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 ALKBH5Q6P6C2 394 aaKnown RBP11.8□□□□□ -0.52
SLIRP-205ENST00000556310 Q6ZVU0 165 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 DSG4Q86SJ6 1040 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 FAM124AQ86V42 546 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 MMAAQ8IVH4 418 aaKnown RBP11.8□□□□□ -0.52
SLIRP-205ENST00000556310 PYROXD2Q8N2H3 581 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 RTL3Q8N8U3 475 aaKnown RBP11.8□□□□□ -0.52
SLIRP-205ENST00000556310 ATP11CQ8NB49 1132 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 OR8K1Q8NGG5 319 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 OR8D1Q8WZ84 308 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 CCDC114Q96M63 670 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 FAM129BQ96TA1 746 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 EIF3CQ99613 913 aaKnown RBP11.8□□□□□ -0.52
SLIRP-205ENST00000556310 NCAPGQ9BPX3 1015 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 SPON2Q9BUD6 331 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 EDEM2Q9BV94 578 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 ACE2Q9BYF1 805 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-205ENST00000556310 MAGEB5Q9BZ81 275 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 BTBD1Q9H0C5 482 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 THAP2Q9H0W7 228 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 SGK2Q9HBY8 427 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 ATP13A1Q9HD20 1204 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 TMEM74BQ9NUR3 256 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 NDFIP2Q9NV92 336 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 MYO1AQ9UBC5 1043 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 SUSD2Q9UGT4 822 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 FZD4Q9ULV1 537 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 NENFQ9UMX5 172 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 AP4E1Q9UPM8 1137 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 ADAMTS9Q9P2N4 1935 aa11.8□□□□□ -0.52
SLIRP-205ENST00000556310 CBX4O00257 560 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 SLC30A4O14863 429 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 FGF10O15520 208 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-205ENST00000556310 CREB3O43889 395 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 PRPSAP2O60256 369 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 RAMP2O60895 175 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 LRCH4O75427 683 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 SEMA4FO95754 770 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 MT-CO1P00395 513 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 IL1BP01584 269 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 CD46P15529 392 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 C5AR1P21730 350 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 GLDCP23378 1020 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 SLC8A1P32418 973 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 ACSL1P33121 698 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 EIF4A3P38919 411 aaKnown RBP11.79□□□□□ -0.52
SLIRP-205ENST00000556310 SERPINH1P50454 418 aaKnown RBP11.79□□□□□ -0.52
SLIRP-205ENST00000556310 SLC20A2Q08357 652 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 ACAP1Q15027 740 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 DUOXA1Q1HG43 343 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 CCDC122Q5T0U0 273 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 IL31Q6EBC2 164 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 SLC23A3Q6PIS1 610 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 LINGO4Q6UY18 593 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 PSTKQ8IV42 348 aaKnown RBP11.79□□□□□ -0.52
SLIRP-205ENST00000556310 ARFGAP1Q8N6T3 406 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 ANKK1Q8NFD2 765 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 CEP76Q8TAP6 659 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 DNASE2BQ8WZ79 361 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 PEBP4Q96S96 227 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 RTKNQ9BST9 563 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 SNRNP25Q9BV90 132 aaKnown RBP11.79□□□□□ -0.52
SLIRP-205ENST00000556310 NUSAP1Q9BXS6 441 aaKnown RBP11.79□□□□□ -0.52
SLIRP-205ENST00000556310 CEP44Q9C0F1 390 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 MAGEH1Q9H213 219 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms