RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 SGCZQ96LD1 299 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 TBCBQ99426 244 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 PAAF1Q9BRP4 392 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 COLEC11Q9BWP8 271 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 MAGEB5Q9BZ81 275 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 MMP28Q9H239 520 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 FSCN3Q9NQT6 498 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 RAP2CQ9Y3L5 183 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 IGLV5-37A0A075B6J1 123 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 IGHV4-28A0A0C4DH34 117 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 MAGEA13PA6NCF6 341 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 RHPN2P1A8MT19 583 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 MCIDASD6RGH6 385 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 KPNA5O15131 536 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 SRGAP2BP0DMP2 458 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 PEPDP12955 493 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 PECAM1P16284 738 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-218ENST00000556256 ATP12AP54707 1039 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 BIRC2Q13490 618 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 DAG1Q14118 895 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 TMEM88Q6PEY1 159 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 MARK2Q7KZI7 788 aaKnown RBP3.53□□□□□ -1.84
SCFD1-218ENST00000556256 TMEM217Q8N7C4 229 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 ATP11CQ8NB49 1132 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 CCDC150Q8NCX0 1101 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 CEP76Q8TAP6 659 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 SLC35F5Q8WV83 523 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 SORCS1Q8WY21 1168 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 CD101Q93033 1021 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 DUX3Q96PT4 197 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 MPHOSPH6Q99547 160 aaKnown RBP3.53□□□□□ -1.84
SCFD1-218ENST00000556256 MYD88Q99836 296 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 TRMT61BQ9BVS5 477 aaKnown RBP3.53□□□□□ -1.84
SCFD1-218ENST00000556256 FRMD8Q9BZ67 464 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-218ENST00000556256 CORO2BQ9UQ03 480 aa3.53□□□□□ -1.84
SCFD1-218ENST00000556256 A0A1W2PPC4 97 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 M0QYT0 321 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 CLGNO14967 610 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 TAF5LO75529 589 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 ALDOAP04075 364 aaKnown RBP3.52□□□□□ -1.85
SCFD1-218ENST00000556256 ITGA5P08648 1049 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 C21orf33P30042 268 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-218ENST00000556256 NOVP48745 357 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 FOXL2P58012 376 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 TAS2R50P59544 299 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 ZBTB16Q05516 673 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 MYBPHQ13203 477 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 PKP1Q13835 747 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 BRD3Q15059 726 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 AAK1Q2M2I8 961 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 ZNF772Q68DY9 489 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-218ENST00000556256 XRRA1Q6P2D8 792 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 SRLQ86TD4 932 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 KRTAP7-1Q8IUC3 87 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 FAM186BQ8IYM0 893 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 OR2C3Q8N628 320 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 ANKRD44Q8N8A2 993 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 ZNF114Q8NC26 417 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 DEPTORQ8TB45 409 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 NEK9Q8TD19 979 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 ANKRD9Q96BM1 317 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-218ENST00000556256 FBXO17Q96EF6 278 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 MCRS1Q96EZ8 462 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 BICD1Q96G01 975 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 SCMH1Q96GD3 660 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 ZNF333Q96JL9 665 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 RIPOR3Q96MK2 946 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 GFM1Q96RP9 751 aaKnown RBP3.52□□□□□ -1.85
SCFD1-218ENST00000556256 ACTR5Q9H9F9 607 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-218ENST00000556256 NLRC4Q9NPP4 1024 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 STARD7Q9NQZ5 370 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 TMEM248Q9NWD8 314 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 ZDHHC7Q9NXF8 308 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 TAGLN3Q9UI15 199 aa3.52□□□□□ -1.85
SCFD1-218ENST00000556256 SRPRBQ9Y5M8 271 aaKnown RBP3.52□□□□□ -1.85
SCFD1-218ENST00000556256 POM121BA6NF01 834 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 NCK2O43639 380 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 ITM2AO43736 263 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 BAG4O95429 457 aaKnown RBP3.51□□□□□ -1.85
SCFD1-218ENST00000556256 AFPP02771 609 aaKnown RBP3.51□□□□□ -1.85
SCFD1-218ENST00000556256 ZNF883P0CG24 379 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 UNGP13051 313 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-218ENST00000556256 RHAGQ02094 409 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 TLE3Q04726 772 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 CSHL1Q14406 222 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 EFHC1Q5JVL4 640 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 KLHDC7AQ5VTJ3 777 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 ANKRD40Q6AI12 368 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 MON1BQ7L1V2 547 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 PALB2Q86YC2 1186 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 BRI3BPQ8WY22 251 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 TNIP3Q96KP6 325 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 SNX27Q96L92 541 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 CCDC138Q96M89 665 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 HIPK3Q9H422 1215 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 PNPLA8Q9NP80 782 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 SNX13Q9Y5W8 968 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 COMMD10Q9Y6G5 202 aa3.51□□□□□ -1.85
SCFD1-218ENST00000556256 SMAD5-AS1Q9Y6J3 95 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms