RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 ERVW-1Q9UQF0 538 aa12.77□□□□□ -0.37
ABCD4-223ENST00000555904 A0A0A0MRY4 1105 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 CFAP69A5D8W1 941 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 KRBA1A5PL33 1030 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 J3KR12 359 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 MATN3O15232 486 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 LIASO43766 372 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 EGFP01133 1207 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 CCNB1P14635 433 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 GLDCP23378 1020 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 SERPINH1P50454 418 aaKnown RBP12.76□□□□□ -0.37
ABCD4-223ENST00000555904 ARF5P84085 180 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 LMNB2Q03252 620 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 MESP2Q0VG99 397 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 SNX1Q13596 522 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 ZNF235Q14590 738 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 PRKD1Q15139 912 aaPredicted RBP12.76□□□□□ -0.37
ABCD4-223ENST00000555904 ACCSLQ4AC99 568 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 DGKKQ5KSL6 1271 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 IER5LQ5T953 404 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 MARC1Q5VT66 337 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 TMEM215Q68D42 235 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 FSTL4Q6MZW2 842 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 ARHGAP36Q6ZRI8 547 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 GSTA5Q7RTV2 222 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 TP53INP2Q8IXH6 220 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 CHPFQ8IZ52 775 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 KDM1BQ8NB78 822 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 MNS1Q8NEH6 495 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 CYB5D2Q8WUJ1 264 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 C1orf54Q8WWF1 131 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 HTR3CQ8WXA8 447 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 SORCS1Q8WY21 1168 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 EDAQ92838 391 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 FATE1Q969F0 183 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 MAGOHBQ96A72 148 aaKnown RBP12.76□□□□□ -0.37
ABCD4-223ENST00000555904 RPL10LQ96L21 214 aaKnown RBP12.76□□□□□ -0.37
ABCD4-223ENST00000555904 TBC1D17Q9HA65 648 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 FBRSL1Q9HCM7 1045 aaKnown RBP12.76□□□□□ -0.37
ABCD4-223ENST00000555904 SMARCAL1Q9NZC9 954 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 FEZ2Q9UHY8 353 aaPredicted RBP12.76□□□□□ -0.37
ABCD4-223ENST00000555904 ZNF148Q9UQR1 794 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 HS3ST2Q9Y278 367 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 R3HDM2Q9Y2K5 976 aaKnown RBP12.76□□□□□ -0.37
ABCD4-223ENST00000555904 STARD13Q9Y3M8 1113 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 KIAA1549LQ6ZVL6 1849 aa12.76□□□□□ -0.37
ABCD4-223ENST00000555904 CCDC188H7C350 402 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 K7EQS6 105 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 SGK1O00141 431 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 KCNK1O00180 336 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 KCNN4O15554 427 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 PHF2O75151 1096 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 ZMPSTE24O75844 475 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 ACTN2P35609 894 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 CTSOP43234 321 aaPredicted RBP12.75□□□□□ -0.37
ABCD4-223ENST00000555904 MMP13P45452 471 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 RECQLP46063 649 aaPredicted RBP12.75□□□□□ -0.37
ABCD4-223ENST00000555904 STK19P49842 368 aaPredicted RBP12.75□□□□□ -0.37
ABCD4-223ENST00000555904 MRPS21P82921 87 aaKnown RBP12.75□□□□□ -0.37
ABCD4-223ENST00000555904 CCINQ13939 588 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 HNRNPDQ14103 355 aaKnown RBP12.75□□□□□ -0.37
ABCD4-223ENST00000555904 LBRQ14739 615 aaKnown RBP12.75□□□□□ -0.37
ABCD4-223ENST00000555904 HSF5Q4G112 596 aaPredicted RBP12.75□□□□□ -0.37
ABCD4-223ENST00000555904 INO80DQ53TQ3 878 aaPredicted RBP12.75□□□□□ -0.37
ABCD4-223ENST00000555904 C2orf27AQ580R0 203 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 LEKR1Q6ZMV7 388 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 SYNPOQ8N3V7 929 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 SH2D3CQ8N5H7 860 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 CCDC89Q8N998 374 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 SLC35B2Q8TB61 432 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 NKD2Q969F2 451 aaPredicted RBP12.75□□□□□ -0.37
ABCD4-223ENST00000555904 RUNDC3BQ96NL0 473 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 VAT1Q99536 393 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 CEP44Q9C0F1 390 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 PDFQ9HBH1 243 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 LTB4R2Q9NPC1 389 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 SEPT3Q9UH03 358 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 DNPEPQ9ULA0 475 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 FARP1Q9Y4F1 1045 aaPredicted RBP12.75□□□□□ -0.37
ABCD4-223ENST00000555904 TTLL3Q9Y4R7 772 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 MRFAP1Q9Y605 127 aa12.75□□□□□ -0.37
ABCD4-223ENST00000555904 BCLAF3A2AJT9 711 aaKnown RBP12.74□□□□□ -0.37
ABCD4-223ENST00000555904 FAM170BA6NMN3 283 aa12.74□□□□□ -0.37
ABCD4-223ENST00000555904 RNF103O00237 685 aa12.74□□□□□ -0.37
ABCD4-223ENST00000555904 SYNCRIPO60506 623 aaKnown RBP12.74□□□□□ -0.37
ABCD4-223ENST00000555904 RNF40O75150 1001 aa12.74□□□□□ -0.37
ABCD4-223ENST00000555904 TMCC1O94876 653 aa12.74□□□□□ -0.37
ABCD4-223ENST00000555904 GAS8O95995 478 aa12.74□□□□□ -0.37
ABCD4-223ENST00000555904 ITGAVP06756 1048 aa12.74□□□□□ -0.37
ABCD4-223ENST00000555904 SRCP12931 536 aa12.74□□□□□ -0.37
ABCD4-223ENST00000555904 HNRNPLP14866 589 aaKnown RBP eCLIP12.74□□□□□ -0.37
ABCD4-223ENST00000555904 STIP1P31948 543 aaKnown RBP12.74□□□□□ -0.37
ABCD4-223ENST00000555904 CHRNA3P32297 505 aa12.74□□□□□ -0.37
ABCD4-223ENST00000555904 TIE1P35590 1138 aa12.74□□□□□ -0.37
ABCD4-223ENST00000555904 HSPA9P38646 679 aaKnown RBP12.74□□□□□ -0.37
ABCD4-223ENST00000555904 FNTAP49354 379 aa12.74□□□□□ -0.37
ABCD4-223ENST00000555904 VASPP50552 380 aaPredicted RBP12.74□□□□□ -0.37
ABCD4-223ENST00000555904 RHOAP61586 193 aa12.74□□□□□ -0.37
ABCD4-223ENST00000555904 IFI35P80217 286 aaPredicted RBP12.74□□□□□ -0.37
ABCD4-223ENST00000555904 ZNF234Q14588 700 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms