RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 DENND1BQ6P3S1 775 aa19.46■□□□□ 0.71
SUPT16H-203ENST00000555752 IGF2-ASQ6U949 168 aa19.46■□□□□ 0.71
SUPT16H-203ENST00000555752 EFL1Q7Z2Z2 1120 aaKnown RBP19.46■□□□□ 0.71
SUPT16H-203ENST00000555752 PTAR1Q7Z6K3 402 aaPredicted RBP19.46■□□□□ 0.71
SUPT16H-203ENST00000555752 ZNF548Q8NEK5 533 aaPredicted RBP19.46■□□□□ 0.71
SUPT16H-203ENST00000555752 BMFQ96LC9 184 aa19.46■□□□□ 0.71
SUPT16H-203ENST00000555752 KLF15Q9UIH9 416 aa19.46■□□□□ 0.71
SUPT16H-203ENST00000555752 BOD1L1Q8NFC6 3051 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 SYNJ2BP-COX16A0A087WUM0 186 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 POM121BA6NF01 834 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 NEMP2A6NFY4 417 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 CDRT15L2A8MXV6 281 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 EFSO43281 561 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 PCDH8O95206 1070 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 RPL34P49207 117 aaKnown RBP19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 VASPP50552 380 aaPredicted RBP19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 NFKB2Q00653 900 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 ZNF177Q13360 481 aaPredicted RBP19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 EIF4EBP2Q13542 120 aaPredicted RBP19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 FGL2Q14314 439 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 FZD2Q14332 565 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 DEFB133Q30KQ1 61 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 KRBA2Q6ZNG9 492 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 PPM1KQ8N3J5 372 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 ATP6V0D2Q8N8Y2 350 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 CHST14Q8NCH0 376 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 RPRD1AQ96P16 312 aaPredicted RBP19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 WDR70Q9NW82 654 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 COX16Q9P0S2 106 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 VPS28Q9UK41 221 aa19.45■□□□□ 0.7
SUPT16H-203ENST00000555752 RP1P56715 2156 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 COL12A1Q99715 3063 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 RAD51BO15315 384 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 SRCP12931 536 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 CHRNA3P32297 505 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 PRCPP42785 496 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 CSRP3P50461 194 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 STILQ15468 1287 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 RABGAP1LQ5R372 815 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 PERM1Q5SV97 790 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 ANKRD40Q6AI12 368 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 ZCCHC8Q6NZY4 707 aaKnown RBP19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 BEND5Q7L4P6 421 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 RRAGAQ7L523 313 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 PIAS4Q8N2W9 510 aaPredicted RBP19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 OR2A12Q8NGT7 310 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 NT5C1BQ96P26 610 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 DUSP23Q9BVJ7 150 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 USP29Q9HBJ7 922 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 GPR27Q9NS67 375 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 VANGL2Q9ULK5 521 aa19.44■□□□□ 0.7
SUPT16H-203ENST00000555752 TRIM49BA6NDI0 452 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 A6NNZ2 444 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 E5RJQ4 531 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 SLC16A3O15427 465 aaKnown RBP19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 SART1O43290 800 aaKnown RBP19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 SNAP91O60641 907 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 TNFSF15O95150 251 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 FMO5P49326 533 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 HNRNPKP61978 463 aaKnown RBP eCLIP19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 SRSF1Q07955 248 aaKnown RBP eCLIP19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 MAPK8IP2Q13387 824 aaPredicted RBP19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 AUHQ13825 339 aaKnown RBP19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 LINC00303Q3SY05 128 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 TMEM259Q4ZIN3 620 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 TPRG1LQ5T0D9 272 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 TTC39BQ5VTQ0 682 aaPredicted RBP19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 NEK5Q6P3R8 708 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 ARHGEF19Q8IW93 802 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 IFT43Q96FT9 208 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 PSMB7Q99436 277 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 GOLPH3LQ9H4A5 285 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 FAM204AQ9H8W3 233 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 POPDC2Q9HBU9 364 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 IL17BQ9UHF5 180 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 PCDHGA8Q9Y5G5 932 aa19.43■□□□□ 0.7
SUPT16H-203ENST00000555752 TRPM6Q9BX84 2022 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 PTPN13Q12923 2485 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 FAM237AA0A1B0GTK4 181 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 SMAD6O43541 496 aaKnown RBP19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 CSF2P04141 144 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 RRM1P23921 792 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 PDX1P52945 283 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 YWHAZP63104 245 aaKnown RBP19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 SRSF6Q13247 344 aaKnown RBP19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 ARL13BQ3SXY8 428 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 C6orf132Q5T0Z8 1188 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 RBM44Q6ZP01 1051 aaKnown RBP19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 C14orf80Q86SX3 495 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 LMO3Q8TAP4 145 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 GRIN3AQ8TCU5 1115 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 CCDC97Q96F63 343 aaPredicted RBP19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 SLC4A5Q9BY07 1137 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 FAM117AQ9C073 453 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 TNKS2Q9H2K2 1166 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 EVA1BQ9NVM1 165 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 DDIT4Q9NX09 232 aa19.42■□□□□ 0.7
SUPT16H-203ENST00000555752 ARMCX3Q9UH62 379 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms