RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SLC38A8A6NNN8 435 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 F7P08709 466 aaPredicted RBP3.88□□□□□ -1.79
SNX6-204ENST00000555541 KLRC2P26717 231 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 AVPR1AP37288 418 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 STAT1P42224 750 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 NEK3P51956 506 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 PICALMQ13492 652 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 PLCB4Q15147 1175 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 ZNF449Q6P9G9 518 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 GATAD2AQ86YP4 633 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 NPAS1Q99742 590 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 HIPK3Q9H422 1215 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 RETREG1Q9H6L5 497 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 ARNT2Q9HBZ2 717 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 OCIAD1Q9NX40 245 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 IL36RNQ9UBH0 155 aa3.88□□□□□ -1.79
SNX6-204ENST00000555541 TBC1D3DA0A087WVF3 549 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TBC1D3IA0A087WXS9 549 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TBC1D3EA0A087X179 549 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TBC1D3KA0A087X1G2 549 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TCRBV7S3A2A0A539 114 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TBC1D3BA6NDS4 549 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 FAM90A18PA6NE21 464 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TBC1D3FA6NER0 549 aaPredicted RBP3.87□□□□□ -1.79
SNX6-204ENST00000555541 FAM90A16PA6NEW6 464 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 MBD3L5A6NJ08 208 aaPredicted RBP3.87□□□□□ -1.79
SNX6-204ENST00000555541 FAM90A9PA6NNJ1 464 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 FAM90A5PA8MXJ8 464 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TBC1D3LB9A6J9 549 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 ASNA1O43681 348 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 LARGE1O95461 756 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 KRT18P05783 430 aaKnown RBP3.87□□□□□ -1.79
SNX6-204ENST00000555541 FAM90A15PP0C7V4 464 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 FAM90A14PP0C7W9 464 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TBC1D3HP0C7X1 549 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 UNGP13051 313 aaPredicted RBP3.87□□□□□ -1.79
SNX6-204ENST00000555541 NUDT6P53370 316 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 SF3A3Q12874 501 aaKnown RBP eCLIP3.87□□□□□ -1.79
SNX6-204ENST00000555541 TRIM60Q495X7 471 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 ZNF569Q5MCW4 686 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TBC1D3GQ6DHY5 549 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TBC1D3CQ6IPX1 549 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 SLC30A9Q6PML9 568 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 SMIM29Q86T20 159 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 IGFN1Q86VF2 1251 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TMEM200AQ86VY9 491 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 SYTL1Q8IYJ3 562 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TBC1D3Q8IZP1 549 aaPredicted RBP3.87□□□□□ -1.79
SNX6-204ENST00000555541 TCP11L2Q8N4U5 519 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 OR14A16Q8NHC5 309 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 LILRB1Q8NHL6 650 aaPredicted RBP3.87□□□□□ -1.79
SNX6-204ENST00000555541 RSC1A1Q92681 617 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 CCDC136Q96JN2 1154 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TNIP3Q96KP6 325 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 TMEM120AQ9BXJ8 343 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 Q9N2J8 555 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 CNTN6Q9UQ52 1028 aa3.87□□□□□ -1.79
SNX6-204ENST00000555541 AQP12BA6NM10 295 aa3.86□□□□□ -1.79
SNX6-204ENST00000555541 MYL1P05976 194 aa3.86□□□□□ -1.79
SNX6-204ENST00000555541 TMPRSS3P57727 454 aa3.86□□□□□ -1.79
SNX6-204ENST00000555541 RNASELQ05823 741 aaKnown RBP3.86□□□□□ -1.79
SNX6-204ENST00000555541 BTBD16Q32M84 506 aa3.86□□□□□ -1.79
SNX6-204ENST00000555541 SRLQ86TD4 932 aa3.86□□□□□ -1.79
SNX6-204ENST00000555541 FJX1Q86VR8 437 aa3.86□□□□□ -1.79
SNX6-204ENST00000555541 FAM71BQ8TC56 605 aa3.86□□□□□ -1.79
SNX6-204ENST00000555541 TMEM41AQ96HV5 264 aa3.86□□□□□ -1.79
SNX6-204ENST00000555541 ACTR5Q9H9F9 607 aaPredicted RBP3.86□□□□□ -1.79
SNX6-204ENST00000555541 DONSONQ9NYP3 566 aa3.86□□□□□ -1.79
SNX6-204ENST00000555541 LZTS1Q9Y250 596 aa3.86□□□□□ -1.79
SNX6-204ENST00000555541 GOLGA6L3A6NEY3 463 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 PAK4O96013 591 aaPredicted RBP3.85□□□□□ -1.79
SNX6-204ENST00000555541 NAGAP17050 411 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 PPM1AP35813 382 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 TECP42680 631 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 BTKQ06187 659 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 SPARCL1Q14515 664 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 STARD3Q14849 445 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 HSP90AB2PQ58FF8 381 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 ANKS1BQ7Z6G8 1248 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 FAM186BQ8IYM0 893 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 HORMAD2Q8N7B1 307 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 ENDOVQ8N8Q3 282 aaKnown RBP3.85□□□□□ -1.79
SNX6-204ENST00000555541 CEP76Q8TAP6 659 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 TMEM163Q8TC26 289 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 STYXQ8WUJ0 223 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 HMGB4Q8WW32 186 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 IGSF21Q96ID5 467 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 SLC25A33Q9BSK2 321 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 SLC22A11Q9NSA0 550 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 TMEM248Q9NWD8 314 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 ARL15Q9NXU5 204 aa3.85□□□□□ -1.79
SNX6-204ENST00000555541 AGO1Q9UL18 857 aaKnown RBP3.85□□□□□ -1.79
SNX6-204ENST00000555541 IGHV4-28A0A0C4DH34 117 aa3.84□□□□□ -1.79
SNX6-204ENST00000555541 HSPB6O14558 160 aa3.84□□□□□ -1.79
SNX6-204ENST00000555541 ASAP2O43150 1006 aa3.84□□□□□ -1.79
SNX6-204ENST00000555541 PRC1O43663 620 aa3.84□□□□□ -1.79
SNX6-204ENST00000555541 BUB3O43684 328 aa3.84□□□□□ -1.79
SNX6-204ENST00000555541 KCNJ13O60928 360 aa3.84□□□□□ -1.79
SNX6-204ENST00000555541 TNFRSF6BO95407 300 aa3.84□□□□□ -1.79
SNX6-204ENST00000555541 GLIPR1P48060 266 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms