RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 TRIM5Q9C035 493 aa12.7□□□□□ -0.38
TRAPPC6B-205ENST00000555269 KLC2Q9H0B6 622 aa12.7□□□□□ -0.38
TRAPPC6B-205ENST00000555269 BTBD1Q9H0C5 482 aa12.7□□□□□ -0.38
TRAPPC6B-205ENST00000555269 MIR1-1HGQ9H1L0 117 aa12.7□□□□□ -0.38
TRAPPC6B-205ENST00000555269 MRPL47Q9HD33 250 aaKnown RBP12.7□□□□□ -0.38
TRAPPC6B-205ENST00000555269 DLL3Q9NYJ7 618 aa12.7□□□□□ -0.38
TRAPPC6B-205ENST00000555269 PPM1HQ9ULR3 514 aa12.7□□□□□ -0.38
TRAPPC6B-205ENST00000555269 NENFQ9UMX5 172 aa12.7□□□□□ -0.38
TRAPPC6B-205ENST00000555269 HS3ST2Q9Y278 367 aa12.7□□□□□ -0.38
TRAPPC6B-205ENST00000555269 NCKAP1Q9Y2A7 1128 aa12.7□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SLCO1B1Q9Y6L6 691 aa12.7□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CEP250Q9BV73 2442 aa12.7□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CKAP5Q14008 2032 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 RALGAPA1Q6GYQ0 2036 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 DNAH14Q0VDD8 3507 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 LNP1A1A4G5 178 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 C4orf47A7E2U8 309 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 MEI4A8MW99 385 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 MCF2LO15068 1137 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 LRCH4O75427 683 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 RNF8O76064 485 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CFIP05156 583 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CYP1A2P05177 515 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 HOXB3P14651 431 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 IL1R2P27930 398 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 MAPKAPK2P49137 400 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 DNA2P51530 1060 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ARF5P84085 180 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TBX2Q13207 712 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SEMA3BQ13214 749 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ELAVL3Q14576 367 aaKnown RBP12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 NUMA1Q14980 2115 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 POLD3Q15054 466 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 DUOXA1Q1HG43 343 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ASTE1Q2TB18 679 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SYCP2LQ5T4T6 812 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ZNF783Q6ZMS7 281 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CHST14Q8NCH0 376 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 OR2A12Q8NGT7 310 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 FNIP1Q8TF40 1166 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 DNASE2BQ8WZ79 361 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 FOXJ1Q92949 421 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TRIM11Q96F44 468 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 KCTD15Q96SI1 283 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SNRNP25Q9BV90 132 aaKnown RBP12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 NUP85Q9BW27 656 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 PACSIN1Q9BY11 444 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 DHX35Q9H5Z1 703 aaKnown RBP12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 EIF2B4Q9UI10 523 aaKnown RBP12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CDV3Q9UKY7 258 aaKnown RBP12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 AP4E1Q9UPM8 1137 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 FCF1Q9Y324 198 aaKnown RBP12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SCINQ9Y6U3 715 aa12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 MUC22E2RYF6 1773 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC6B-205ENST00000555269 C2orf72A6NCS6 295 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CDX4O14627 284 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 PRPSAP2O60256 369 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 RAMP2O60895 175 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 FSBPO95073 299 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SEMA4FO95754 770 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CTSLP07711 333 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 GOT1P17174 413 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 DESP17661 470 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CHRNA3P32297 505 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 DRD3P35462 400 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SLC20A2Q08357 652 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TRIM14Q14142 442 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 PUM1Q14671 1186 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TTC31Q49AM3 519 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ARSIQ5FYB1 569 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 KCNT1Q5JUK3 1230 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 WDR45BQ5MNZ6 344 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 PEAR1Q5VY43 1037 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TXNRD3NBQ6F5E7 133 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 RETSATQ6NUM9 610 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SLC23A3Q6PIS1 610 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 USP30Q70CQ3 517 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CPNE8Q86YQ8 564 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 RTL3Q8N8U3 475 aaKnown RBP12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 OR2I1PQ8NGU4 316 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 NETO1Q8TDF5 533 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 OR8D1Q8WZ84 308 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SNX19Q92543 992 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 BIRC7Q96CA5 298 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 EPAS1Q99814 870 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 EDEM2Q9BV94 578 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 NUSAP1Q9BXS6 441 aaKnown RBP12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 MAGEH1Q9H213 219 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 RETREG1Q9H6L5 497 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ZWILCHQ9H900 591 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SGK2Q9HBY8 427 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ABHD10Q9NUJ1 306 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ZNHIT6Q9NWK9 470 aaKnown RBP12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 EVLQ9UI08 416 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SCML1Q9UN30 329 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SLC6A14Q9UN76 642 aa12.68□□□□□ -0.38
TRAPPC6B-205ENST00000555269 WASH4PA8MWX3 477 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 RASA4BC9J798 803 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 AKR1B15C9JRZ8 316 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 EEF2KO00418 725 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms