RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 AKAP10O43572 662 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 GSRP00390 522 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 IDUAP35475 653 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 RPL10AP62906 217 aaKnown RBP15.91■□□□□ 0.14
SYNE3-203ENST00000554873 PERM1Q5SV97 790 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 HEATR4Q86WZ0 1026 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 RFX6Q8HWS3 928 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 WDR49Q8IV35 697 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 KCTD6Q8NC69 237 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 SORT1Q99523 831 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 HOXD1Q9GZZ0 328 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 SATB2Q9UPW6 733 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 MAFBQ9Y5Q3 323 aaPredicted RBP15.91■□□□□ 0.14
SYNE3-203ENST00000554873 PSME4Q14997 1843 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 RGSL1A5PLK6 1076 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 CXorf49A8MYA2 514 aaPredicted RBP15.91■□□□□ 0.14
SYNE3-203ENST00000554873 GPR25O00155 361 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 CFLARO15519 480 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 TMBIM6P55061 237 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 STXBP5Q5T5C0 1151 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 ZNF280DQ6N043 979 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 SNX32Q86XE0 403 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 ADGRF2Q8IZF7 708 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 LRTOMTQ8WZ04 291 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 USP13Q92995 863 aaPredicted RBP15.91■□□□□ 0.14
SYNE3-203ENST00000554873 ZNF486Q96H40 463 aaPredicted RBP15.91■□□□□ 0.14
SYNE3-203ENST00000554873 ZBED3Q96IU2 234 aaPredicted RBP15.91■□□□□ 0.14
SYNE3-203ENST00000554873 TUBA1CQ9BQE3 449 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 RMND5AQ9H871 391 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 VRTNQ9H8Y1 702 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 ZNF302Q9NR11 478 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 NXF1Q9UBU9 619 aaKnown RBP15.91■□□□□ 0.14
SYNE3-203ENST00000554873 ST14Q9Y5Y6 855 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 KAT6AQ92794 2004 aa15.91■□□□□ 0.14
SYNE3-203ENST00000554873 ILVBLA1L0T0 632 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 AVILO75366 819 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 CSPG5O95196 566 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 FGFR3P22607 806 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 TGM1P22735 817 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 GRK2P25098 689 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 GRM5P41594 1212 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 PPP6R3Q5H9R7 873 aaPredicted RBP15.9■□□□□ 0.14
SYNE3-203ENST00000554873 ANKRD13BQ86YJ7 626 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 RNF148Q8N7C7 305 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 SUN5Q8TC36 379 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 SLC7A3Q8WY07 619 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 CFAP36Q96G28 342 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 CDHR1Q96JP9 859 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 TMEM134Q9H6X4 195 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 MARCH7Q9H992 704 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 PCDHGA11Q9Y5H2 935 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 A6NL46 340 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 APOC4-APOC2K7ER74 178 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 APOC2P02655 101 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 MYF6P23409 242 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 PIK3R1P27986 724 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 AP3M2P53677 418 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 CAPSQ13938 189 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 RFPL4BQ6ZWI9 263 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 COLGALT2Q8IYK4 626 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 CMASQ8NFW8 434 aaPredicted RBP15.9■□□□□ 0.14
SYNE3-203ENST00000554873 SPATA18Q8TC71 538 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 DCPSQ96C86 337 aaKnown RBP15.9■□□□□ 0.14
SYNE3-203ENST00000554873 TEPSINQ96N21 525 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 TP63Q9H3D4 680 aaPredicted RBP15.9■□□□□ 0.14
SYNE3-203ENST00000554873 COL4A5P29400 1685 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 DUOXA2Q1HG44 320 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 MTX3Q5HYI7 312 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 NPNTQ6UXI9 565 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 ZBTB49Q6ZSB9 765 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 Q8N9G6 341 aaPredicted RBP15.9■□□□□ 0.14
SYNE3-203ENST00000554873 REPS2Q8NFH8 660 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 RP9Q8TA86 221 aaKnown RBP15.9■□□□□ 0.14
SYNE3-203ENST00000554873 CIB1Q99828 191 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 RNF38Q9H0F5 515 aa15.9■□□□□ 0.14
SYNE3-203ENST00000554873 DNMT3BQ9UBC3 853 aaKnown RBP15.9■□□□□ 0.14
SYNE3-203ENST00000554873 TRDMT1O14717 391 aaKnown RBP15.89■□□□□ 0.13
SYNE3-203ENST00000554873 UBL4AP11441 157 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 CD19P15391 556 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 PRKCHP24723 683 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 MIPP30301 263 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 ADSLP30566 484 aaPredicted RBP15.89■□□□□ 0.13
SYNE3-203ENST00000554873 SERPINB5P36952 375 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 OPRL1P41146 370 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 GRIA3P42263 894 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 ASPAP45381 313 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 MLLT10P55197 1068 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 YWHAEP62258 255 aaKnown RBP15.89■□□□□ 0.13
SYNE3-203ENST00000554873 BTBD8Q5XKL5 378 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 FNIP1Q8TF40 1166 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 SH3YL1Q96HL8 342 aaPredicted RBP15.89■□□□□ 0.13
SYNE3-203ENST00000554873 CEP295NLQ96MC4 621 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 CPXM1Q96SM3 734 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 WDR12Q9GZL7 423 aaKnown RBP15.89■□□□□ 0.13
SYNE3-203ENST00000554873 HMG20AQ9NP66 347 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 RABL2AQ9UBK7 228 aaPredicted RBP15.89■□□□□ 0.13
SYNE3-203ENST00000554873 APBA3O96018 575 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 ACADSBP45954 432 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 KRT6CP48668 564 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 NUMBP49757 651 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms