RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 PQLC3Q8N755 202 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 TSGA13Q96PP4 275 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 TUBB2BQ9BVA1 445 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 MAGEB5Q9BZ81 275 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 KLC2Q9H0B6 622 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 CHRDQ9H2X0 955 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 NDFIP2Q9NV92 336 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 UBA2Q9UBT2 640 aaPredicted RBP8.23□□□□□ -1.09
LINC01397-201ENST00000554808 VPS51Q9UID3 782 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 INTS6Q9UL03 887 aaKnown RBP8.23□□□□□ -1.09
LINC01397-201ENST00000554808 CLEC4EQ9ULY5 219 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 MMP17Q9ULZ9 603 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 SNX12Q9UMY4 172 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 ERVW-1Q9UQF0 538 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 SAR1BQ9Y6B6 198 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 TNRC6BQ9UPQ9 1833 aaKnown RBP8.23□□□□□ -1.09
LINC01397-201ENST00000554808 DOCK9Q9BZ29 2069 aa8.23□□□□□ -1.09
LINC01397-201ENST00000554808 A0A0D9SEW6 157 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 GOLGA6L10A0A0M3HER8 536 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 EDDM13A0A1B0GTR0 161 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 TARSL2A2RTX5 802 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 CFAP69A5D8W1 941 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 SHISA7A6NL88 538 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 CBX4O00257 560 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 PGRMC1O00264 195 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 DFFAO00273 331 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 ALOX15BO15296 676 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 ATP9BO43861 1147 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 PRAMEF11O60813 436 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 RNF40O75150 1001 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 NEBLO76041 1014 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 CES1P23141 567 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 CASQ1P31415 396 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 TIE1P35590 1138 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 RECQLP46063 649 aaPredicted RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 PAPOLAP51003 745 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 CCR3P51677 355 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 RAD51Q06609 339 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 PPIDQ08752 370 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 SFSWAPQ12872 951 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 KLF1Q13351 362 aaPredicted RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 HNRNPDQ14103 355 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 ZNF234Q14588 700 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 NOMO1Q15155 1222 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 FNDC3BQ53EP0 1204 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 RALGPS1Q5JS13 557 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 DCAF12L1Q5VU92 463 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 PAPD7Q5XG87 772 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 KAZNQ674X7 775 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 CWF19L1Q69YN2 538 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 HEATR6Q6AI08 1181 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 NYAP1Q6ZVC0 841 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 SYT13Q7L8C5 426 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 DSG4Q86SJ6 1040 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 SLC13A5Q86YT5 568 aaPredicted RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 CHPFQ8IZ52 775 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 APCDD1Q8J025 514 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 ZNF687Q8N1G0 1237 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 RASGEF1CQ8N431 466 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 SPEM1Q8N4L4 309 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 FBXL6Q8N531 539 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 PCDH20Q8N6Y1 951 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 NPWQ8N729 165 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 ATP11CQ8NB49 1132 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 PRSS33Q8NF86 280 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 FLCNQ8NFG4 579 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 OR7D4Q8NG98 312 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 OR52K2Q8NGK3 314 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 RPLP0P6Q8NHW5 317 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 ACTRT1Q8TDG2 376 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 USP33Q8TEY7 942 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 TFB1MQ8WVM0 346 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 HMCESQ96FZ2 354 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 P2RY11Q96G91 374 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 OLFM3Q96PB7 478 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 PPP1R2P1Q96PQ5 205 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 OSBPL9Q96SU4 736 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 PSMB7Q99436 277 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 VAT1Q99536 393 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 GABRG3Q99928 467 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 SPON2Q9BUD6 331 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 SLC39A8Q9C0K1 460 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 KCNH6Q9H252 994 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 NOL6Q9H6R4 1146 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 LMAN1LQ9HAT1 526 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 POLMQ9NP87 494 aaPredicted RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 ETNK2Q9NVF9 386 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 DTLQ9NZJ0 730 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 IPO11Q9UI26 975 aaKnown RBP8.22□□□□□ -1.09
LINC01397-201ENST00000554808 SCML1Q9UN30 329 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 HEY1Q9Y5J3 304 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 MYLKQ15746 1914 aa8.22□□□□□ -1.09
LINC01397-201ENST00000554808 ENC1O14682 589 aa8.21□□□□□ -1.1
LINC01397-201ENST00000554808 TRIM24O15164 1050 aa8.21□□□□□ -1.1
LINC01397-201ENST00000554808 MATN3O15232 486 aa8.21□□□□□ -1.1
LINC01397-201ENST00000554808 CEP104O60308 925 aa8.21□□□□□ -1.1
LINC01397-201ENST00000554808 SYNCRIPO60506 623 aaKnown RBP8.21□□□□□ -1.1
LINC01397-201ENST00000554808 MAFKO60675 156 aa8.21□□□□□ -1.1
LINC01397-201ENST00000554808 RNASEH1O60930 286 aaKnown RBP8.21□□□□□ -1.1
LINC01397-201ENST00000554808 ZMPSTE24O75844 475 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms