RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 CYP3A4P08684 503 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 CKMT1AP12532 417 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 PEPDP12955 493 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 MCM2P49736 904 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TLE3Q04726 772 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 RNASELQ05823 741 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 MFSD13AQ14CX5 517 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 DAZAP2Q15038 168 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 SMAD1Q15797 465 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 CNGA3Q16281 694 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 FAM110CQ1W6H9 321 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 AWAT1Q58HT5 328 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 MORN5Q5VZ52 161 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 DGAT2L7PQ6IED9 249 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TMEM65Q6PI78 240 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 VSTM1Q6UX27 236 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 SERPINA13PQ6UXR4 307 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 KYAT3Q6YP21 454 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 ANKS1BQ7Z6G8 1248 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TMEM57Q8N5G2 664 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 ADAMTS18Q8TE60 1221 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 AKAP1Q92667 903 aaKnown RBP eCLIP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 USP13Q92995 863 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 RPL36ALQ969Q0 106 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TRMT61AQ96FX7 289 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 KAZALD1Q96I82 304 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TBATAQ96M53 351 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 COG8Q96MW5 612 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 ELOVL1Q9BW60 279 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 RNF26Q9BY78 433 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 ABHD16BQ9H3Z7 469 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 RIC8AQ9NPQ8 531 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TMLHEQ9NVH6 421 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 C9orf78Q9NZ63 289 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 SEMA5BQ9P283 1151 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 KLHL13Q9P2N7 655 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 DERAQ9Y315 318 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 PCDHA10Q9Y5I2 948 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 LRRFIP2Q9Y608 721 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 IGSF1Q8N6C5 1336 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 ZNF521Q96K83 1311 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 ADCY9O60503 1353 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 BRD4O60885 1362 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 GPRASP1Q5JY77 1395 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 SPTBN5Q9NRC6 3674 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 RRBP1Q9P2E9 1410 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TULP4Q9NRJ4 1543 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 C5P01031 1676 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 LMO7Q8WWI1 1683 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 TIAM2Q8IVF5 1701 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CUL9Q8IWT3 2517 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 XIRP2A4UGR9 3374 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 RRN3P2A6NIE6 340 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 FAM90A20PA6NIJ5 464 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 AGAP5A6NIR3 686 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 C3orf70A6NLC5 250 aaPredicted RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 POC1B-GALNT4F8VUJ3 575 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 SEPT4O43236 478 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 HNRNPRO43390 633 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 MOSPD3O75425 235 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 HEXIM1O94992 359 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 TUBB4AP04350 444 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PYGLP06737 847 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CYP21A2P08686 494 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CYP2A6P11509 494 aaPredicted RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 ATF7P17544 494 aaPredicted RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CERS1P27544 350 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 SLC8A1P32418 973 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PCP4P48539 62 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 AGTR2P50052 363 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 LBX1P52954 281 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 RCAN1P53805 252 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 FOXL2P58012 376 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 TAS2R50P59544 299 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 WDR5P61964 334 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 POU5F1BQ06416 359 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PDCLQ13371 301 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 GAB1Q13480 694 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 SLC12A1Q13621 1099 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 DCTN1Q14203 1278 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 KCNB1Q14721 858 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 LARS2Q15031 903 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 Q4G0T1 1027 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CCDC70Q6NSX1 233 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 TMEM88Q6PEY1 159 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 LVRNQ6Q4G3 990 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 SYNE3Q6ZMZ3 975 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 MMS22LQ6ZRQ5 1243 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 DCDC5Q6ZRR9 648 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 RASGRP2Q7LDG7 609 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 LAS2Q8IYD9 372 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 GALNT4Q8N4A0 578 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PAF1Q8N7H5 531 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 FSIP1Q8NA03 581 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 SRFBP1Q8NEF9 429 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CEP70Q8NHQ1 597 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 KTI12Q96EK9 354 aaPredicted RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 HIC2Q96JB3 615 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 ASB2Q96Q27 587 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 FYTTD1Q96QD9 318 aaKnown RBP1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms